Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2622 |
Symbol | |
ID | 4245347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4056388 |
End bp | 4057014 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638107691 |
Product | exopolysaccharide synthesis, ExoD |
Protein accession | YP_722290 |
Protein GI | 113476229 |
COG category | [R] General function prediction only |
COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.512151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.293711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAAT TATCTGTAGA ATTACAACAA TATTTTTTTG ATGAAAAACG AACTCCTCAA GTTACTTTGA GAGATATTAT TGATTTAGCA GGAGAGAGAA TTTTTGGCTT TTTATTCGTA ATTTTGTCTC TACCTTCAGC TTTGCCTATA CCTGCTCCTG GTTATTCTAT TCCATTTGGA ATTTTATTGT TTTTATTGGC AGTTCAACTA ATAATTGGTT CTACAACTCC CTGGTTACCT CAGAGTTGGT TAAATAATAC AATTTCTCTT CAGAAAGTAC AAGGAATTTT GAACTCTGGT ATTCCTTGGT TACGGAAAAT TGAGTTGATA TCTCGTCCTC GTTTGAGTTA TATTTGTACG AGTATTATTG GTAGAATTGT GGTTGGTTGC GCGATCGCTC TTATGGCTAT CTCAATGATG ATACCTATTC CTGGTACTAA TACTTTACCA GCGATCGGGA TTTTTGTTAC TGGCTTTGGT TTGTTAGATG ATGATGGTTT TATTAGTCTG GTTGGTTTGG TACTCTGTTT AATGGGTGCA ATTTTAAGCG GTCTAATTCT GATATTTGGT TATGAGGTTG TTAAAGGTGG AATTAAATTA ATTAAAAATT TTCTTACTTC AAATTAG
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Protein sequence | MAKLSVELQQ YFFDEKRTPQ VTLRDIIDLA GERIFGFLFV ILSLPSALPI PAPGYSIPFG ILLFLLAVQL IIGSTTPWLP QSWLNNTISL QKVQGILNSG IPWLRKIELI SRPRLSYICT SIIGRIVVGC AIALMAISMM IPIPGTNTLP AIGIFVTGFG LLDDDGFISL VGLVLCLMGA ILSGLILIFG YEVVKGGIKL IKNFLTSN
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