Gene Tery_2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2622 
Symbol 
ID4245347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4056388 
End bp4057014 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content34% 
IMG OID638107691 
Productexopolysaccharide synthesis, ExoD 
Protein accessionYP_722290 
Protein GI113476229 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.512151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.293711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAAT TATCTGTAGA ATTACAACAA TATTTTTTTG ATGAAAAACG AACTCCTCAA 
GTTACTTTGA GAGATATTAT TGATTTAGCA GGAGAGAGAA TTTTTGGCTT TTTATTCGTA
ATTTTGTCTC TACCTTCAGC TTTGCCTATA CCTGCTCCTG GTTATTCTAT TCCATTTGGA
ATTTTATTGT TTTTATTGGC AGTTCAACTA ATAATTGGTT CTACAACTCC CTGGTTACCT
CAGAGTTGGT TAAATAATAC AATTTCTCTT CAGAAAGTAC AAGGAATTTT GAACTCTGGT
ATTCCTTGGT TACGGAAAAT TGAGTTGATA TCTCGTCCTC GTTTGAGTTA TATTTGTACG
AGTATTATTG GTAGAATTGT GGTTGGTTGC GCGATCGCTC TTATGGCTAT CTCAATGATG
ATACCTATTC CTGGTACTAA TACTTTACCA GCGATCGGGA TTTTTGTTAC TGGCTTTGGT
TTGTTAGATG ATGATGGTTT TATTAGTCTG GTTGGTTTGG TACTCTGTTT AATGGGTGCA
ATTTTAAGCG GTCTAATTCT GATATTTGGT TATGAGGTTG TTAAAGGTGG AATTAAATTA
ATTAAAAATT TTCTTACTTC AAATTAG
 
Protein sequence
MAKLSVELQQ YFFDEKRTPQ VTLRDIIDLA GERIFGFLFV ILSLPSALPI PAPGYSIPFG 
ILLFLLAVQL IIGSTTPWLP QSWLNNTISL QKVQGILNSG IPWLRKIELI SRPRLSYICT
SIIGRIVVGC AIALMAISMM IPIPGTNTLP AIGIFVTGFG LLDDDGFISL VGLVLCLMGA
ILSGLILIFG YEVVKGGIKL IKNFLTSN