| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2528 |
|---|
| Symbol | |
|---|
| ID | 4245063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 3899425 |
|---|
| End bp | 3900138 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638107606 |
|---|
| Product | ribose-5-phosphate isomerase A |
|---|
| Protein accession | YP_722205 |
|---|
| Protein GI | 113476144 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.154355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACAG AACAAGACCC GACCACGTTA ATGAAACAGC AAGTCGGCAA AGCTGCTGCT
GAGGAAGTAA AATCTGGTAT GATAGTAGGT TTAGGCACAG GTTCAACTAC TGCCTACATG
ATTCAATTTT TAGGAGAACT CCTCCAAAGA GGTGAACTCA AAGATATCAA AGGTATCCCT
ACCTCCTTCC AGTCAACCGT ATTAGCTAAA AAGTATGGTG TACCATTAAC AACCCTTGAT
GAAGTTGATT ATATGGATAT TGCCATTGAT GGGGCAGATG AAGTTGACCC ACAAAAAAAT
CTGATTAAAG GTGGTGGAGC CGCTCATACT CGTGAGAAAA TTGTAGACTG TTTAGCAGAA
AAGTTTGTTG TCGTAGTAGA TAGTTCTAAA CTAGTAGATA AATTGGGTTC TACTTTTTTA
TTGCCCGTAG AAGTTATACC CATGGCAATG AATCCTGTAA TTCGGGCGAT CGAAAAATTG
GGTGGTCAAC CAGAAGTACG GATGGGAGTG AAAAAGGCCG GACCTATAGT CACAGATCAA
GGTAATTTGG TTATTGATGT CAAGTTTGAT TCCATTGATA ACCCTGGGGA GCTAGAAAAA
AGTTTAAATA ATATTCCTGG AGTTTTGGAA AATGGCTTAT TTGTAGGGGT TGCAGATGTA
ATTTTAGTAG GAGAAATTGA CAATGGAAAA CCAATAGTTA GGACAATTTC TTAA
|
|---|
| Protein sequence | MVTEQDPTTL MKQQVGKAAA EEVKSGMIVG LGTGSTTAYM IQFLGELLQR GELKDIKGIP
TSFQSTVLAK KYGVPLTTLD EVDYMDIAID GADEVDPQKN LIKGGGAAHT REKIVDCLAE
KFVVVVDSSK LVDKLGSTFL LPVEVIPMAM NPVIRAIEKL GGQPEVRMGV KKAGPIVTDQ
GNLVIDVKFD SIDNPGELEK SLNNIPGVLE NGLFVGVADV ILVGEIDNGK PIVRTIS
|
|---|
| |