Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2353 |
Symbol | |
ID | 4245001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3635609 |
End bp | 3637234 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638107446 |
Product | hypothetical protein |
Protein accession | YP_722046 |
Protein GI | 113475985 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAGAAA GTATTATTTG GATATTATTA ACTGGCTTTT TTGTCGGTGA AATTGCCTTG AGGTTAAAAG CACCACCCCT AATAGGAATG CTATTAGTGG GAATATTATT AGGTCCTCAA ATTAGCAATA CTATCGACTC TAGCATTTTG GAAGCTGCCG ACTCTCTGCG CACCTTTGCT GTAACAATAA TTTTAATGAA AGCAGGCTTA GGTCTAGACA GAGAAAAATT AGCACAACAA GGTAGTGTAG CACTGCGCCT AGGTTTTCTC CCAGCAACCT GTGAAGCTAT TGTTATTGCC CTAGCCGCTA TGTGGTTACT TAATTTTGAC TTTGCTACCG GGTTGTTATT AGGCTGTATC ATCGGTGCCG AGTCTCCTGC AGTTATTGTT CCTGGAATGT TGCGGCTCAA AAGTTTGGGT TGGGGCGTGA CTAAAGGTAT TCCTGATGCA ATTTTAACTG GTAGTGCTTT GTCAGATGTT TTGCTGTTGT TAATTTTTAG TTTACTACTG GCATTTTTAT CCCAGGGAAC AACTATTGGC ATAACTTTAC CTGGTGGCAT CACTATAAAC TTATTACAAA TATTACCCTT TCAGGTTACT CTGCAAATAA TTTTGGGAGC GATCGCTGGG TTGCTGATGG CGCAAATATT AGTATTATTA TTAGTCAAAC AAAATTGGAC TCAAAATTCT ACCCAAGATA CTTTAGTTGC TGGAAGCCTG ACCCTCTTAT TAGTAGTCTT AGCAGAAAAA TTCCCCATAT TCTCTGGTTA TTTGGCAGTC ATGGCAACAG GATTTTTTGT GCTCGAATTT GATCCTCCCC TGGGGCGACG CTTAAGAAAT GGTTTTGAGA CCTTGTGGAC GATAGCGCAA ATAATTTTGT TTGTTTTGCT CGGTGCTAGT ATCCCCTTGC AAGTCCTAGA AAATGTCTTC TTAGTGGGGT TATTAATTTT AGCTCTGGGT ACTTTTGTCG GGCGGATGTT TGGTTGGTAT CTCTCGACCT TGGGCAGTAA TTGGAATTTG CAAGAACGTC TATTTTTACT ACCTGGAAAT TCTGCAAAAG CAACTGTGCA GGCTGCTATT GGTGCTATTC CTCTAGCGGT AGGCATTGAG GGAGGAGAAA CAATTTTAGC GATCGCCGCC CTTTCCATAT TAGTCACAGC ACCTTTGGGA GCTTGGGCAA TACCTGCCTT AGCACCAAAA CTGTTAGAAA AAGGAGAAGT CGATCCGACA AAAGTAGCGA TCGCTCGTCC TATTATATTA TTAGCCGCCG TTGATACCTC ACCTCTTGCC GTTGATGTGT TATTAAAAGC TGCAGAACTG GCGAGGCGTT GTGACGGGGA AATTGTAGTC TTGCACGTTC TTCAATTTGA ATACCGCAAC AGTATTGAGC AACTGCGACA GCAAACTAGG CAACTTTTGG CAGATATTCG GCATCAGTTT ATAACTGTTG CGGGTGATGC TTCAGAAGAA ATAATTTTTA TAGCGCAAGA GTATGGAGCA GCAGAAATTG TCATAGGAAA AAAGGGGGAT CGTTTATGGG ACAATGTGTT AGTTGGGTCA GTTTCTCAAG CAGTTTTAGA AAAGAGTTTA ATTCCTGTAG TGGTAGTTGA AAAAATAAAA ACATAG
|
Protein sequence | MLESIIWILL TGFFVGEIAL RLKAPPLIGM LLVGILLGPQ ISNTIDSSIL EAADSLRTFA VTIILMKAGL GLDREKLAQQ GSVALRLGFL PATCEAIVIA LAAMWLLNFD FATGLLLGCI IGAESPAVIV PGMLRLKSLG WGVTKGIPDA ILTGSALSDV LLLLIFSLLL AFLSQGTTIG ITLPGGITIN LLQILPFQVT LQIILGAIAG LLMAQILVLL LVKQNWTQNS TQDTLVAGSL TLLLVVLAEK FPIFSGYLAV MATGFFVLEF DPPLGRRLRN GFETLWTIAQ IILFVLLGAS IPLQVLENVF LVGLLILALG TFVGRMFGWY LSTLGSNWNL QERLFLLPGN SAKATVQAAI GAIPLAVGIE GGETILAIAA LSILVTAPLG AWAIPALAPK LLEKGEVDPT KVAIARPIIL LAAVDTSPLA VDVLLKAAEL ARRCDGEIVV LHVLQFEYRN SIEQLRQQTR QLLADIRHQF ITVAGDASEE IIFIAQEYGA AEIVIGKKGD RLWDNVLVGS VSQAVLEKSL IPVVVVEKIK T
|
| |