Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2288 |
Symbol | |
ID | 4243283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3557804 |
End bp | 3559585 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638107386 |
Product | Na+/solute symporter |
Protein accession | YP_721986 |
Protein GI | 113475925 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.175475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA TTGATTATAT AATTGTTACA ATTTATCTGT TATTTATAGT AATCTTTGGA TTTTTTATAC AAAGAAAAGC ATCGACAGGA ATAGAGTCTT ACTTTCTCGG AAATCGTAAT CTTCCTTGGT GGATTTTGGG TGCTTCTGGT ATGGCTTCTA ATACTGATTT AGCTGGTACT ATGCTATTAA CTTCTTTAGT CTATTCTCTG GGAACTAAGG GCTTTTTTAT TGAAATTCGG GGTGGAGTTG TATTAATTAT GGCGTTCCTA ATGACGTTTA TGGGAAAGTG GAATCGTCGG GCTCAAGTAA TGACTATTGC AGAATGGATG GAGTTACGTT TTGGTAAGAA TAGGGAAGGA AATATAGCCA GAATTATTAG TGCGGTTGCT AATATTATTT TTGCTATTGG TACCATGAGT TATTTTGCTC TTGGAGGAGG AAAATTTTTA GGAGGATTTT TAGGTATTGA TGATAGAGTT GCTGGAATAT TGCTGATTTT ATTGGCTCTT ATCTATACAG CTGTAAGTGG ATTTTATGGG GTTGTTTTGA CAGATGTTTT CCAGGGAATT TTGATTTTTG TTGCAATTAT ATATATCTGT TTTCTGGCTT TTCAAATAGT AAACTTACCA GAGAATTTTG TGGTTTCAAT TCCAGGTACG GAACAATTAC AAGAATTGAG TTTGAGAGAA TGGAGCAGTC TTTTTCCACC AATTAAAATT GACTTACCAG GAGATTATAG TATTTTTAAT TTGTTTGGTG GCGTGATGTT ATTTTATGTT TTTAAAGTAT TTCTAGAAGG CGGTGCTGGA GGAGGTGGTT ATATGATTCA ACGTTACTTC GCTGCTAAGA ATGATCGGGA AGCTGGTTTA CTTTCTTTAT TCTGGATTTT TTTACTATCT TTTCGCTGGC CTTTGGTTAC ATCTTTGGCA ATATTAGGAA TAGATTATGG TTTGAAAAAT CAGATAATTT CTGACCCAGA ATTAGTCTTG CCTACTGTAA TTTCTGAATA TATTCCAGCG GGAGTTAAAG GTTTATTGGT TGCCTGTTTT ATTGCTGCTG CAATGTCAAC TTTTGATTCG ATAATTAATG CTAGTGCTGC CTATTGGGTA AAGGATATTT ATCAAGCTTA TATTAAACCT GAAGCTAATA ATCAACAATT GGTTAATCAA GGTCGTTTAG CTTCGGTTGT TATTGTTAGT TTGGGATTAA TTTTTAGTTT TAATATTACG AATATTAATG ATATTTGGGG ATGGTTAACT TTAGGGTTAG GAACTGGGTT GTTTATTCCT TTAGTATTGA GATGGTATTG GTGGCGATTT AATGGTTATG GATTTGCCAT TGGTACTGGT GCAGGTTTAG TTGGAGCTAT TTTGACAAAA GCAGTTATTT TACCTTTTTT GAATCTGCCT CAACTTCAAG AATATATTCT GTTTTTAGTT CCAAGTATTT GTTCTTTTTT AGGATGTATT TTAGGAACAT TGTTAACTCC ATCAACTAAT TTGGAAGTGA TTGATAATTT TTATCGGGTA ACTCGACCTT TTGGTTTTTG GGGAGTAGTT AGTAAGAATT TACCAACCAA TATTCAAGCA AAAATTAAAA GAGAAAATCG ACGAGATATT CTGGCAACAT TTATTGCAAT TCCTTGGCAG TTGGTTTTAT TTTTAATGGG AATAATTTTA ATGATGAAAC AGTGGGATAG TTTTGGTATT TTATTATTAA TGTTTATTTT GTTGTCGATA GGATTATATT TTACTTGGTT TAAGCATCTA GAAAAAATAT AG
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Protein sequence | MEKIDYIIVT IYLLFIVIFG FFIQRKASTG IESYFLGNRN LPWWILGASG MASNTDLAGT MLLTSLVYSL GTKGFFIEIR GGVVLIMAFL MTFMGKWNRR AQVMTIAEWM ELRFGKNREG NIARIISAVA NIIFAIGTMS YFALGGGKFL GGFLGIDDRV AGILLILLAL IYTAVSGFYG VVLTDVFQGI LIFVAIIYIC FLAFQIVNLP ENFVVSIPGT EQLQELSLRE WSSLFPPIKI DLPGDYSIFN LFGGVMLFYV FKVFLEGGAG GGGYMIQRYF AAKNDREAGL LSLFWIFLLS FRWPLVTSLA ILGIDYGLKN QIISDPELVL PTVISEYIPA GVKGLLVACF IAAAMSTFDS IINASAAYWV KDIYQAYIKP EANNQQLVNQ GRLASVVIVS LGLIFSFNIT NINDIWGWLT LGLGTGLFIP LVLRWYWWRF NGYGFAIGTG AGLVGAILTK AVILPFLNLP QLQEYILFLV PSICSFLGCI LGTLLTPSTN LEVIDNFYRV TRPFGFWGVV SKNLPTNIQA KIKRENRRDI LATFIAIPWQ LVLFLMGIIL MMKQWDSFGI LLLMFILLSI GLYFTWFKHL EKI
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