| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1998 |
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| Symbol | |
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| ID | 4243425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 3112190 |
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| End bp | 3113221 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638107113 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_721720 |
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| Protein GI | 113475659 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAATAC CAATTACAGC TTGTGAAGTT GAAGGTACAT CAGACCAAAA AGAAGTTACT
CAGGAAAATA AACAAGTCAC TAGTCGTTTA GATATTGTCA AAAATCGTGG TAAACTGATC
TGTGGTGTAG AAGGTGGTAT TCCTGGATTC AGTTTTGTAG ACAAGAATGG TAACTACTCA
GGAATAGATG TAGATATCTG TAAGGCGGTA GCGGCGGCAT TATTCAATGA TCCAAATCTA
GTAGAGTATC GTAACTTAGA TTCAACGGAG CGTTTTACTG CTCTTAACGG TGGGGAAGTA
GATATGCTTT CTCGCAACAC AACATGGACT GTTAGTCGAG ATACTACTGT TGGTCTTGAG
TTTGCCCCTA CTACATTTTA TGATGGTCAA GGCATGATGG TTCGTGCTAA TAGTGGAGTT
GAATCTTTAG AGGACTTGCA AGGCAAATCA ATTTGTGTCG AAGCAGGGAC AACTACAGAA
TTAAACTTAA CAGATAATCT CCGCCAACGA AATGTGACAG CTGAGACATT AACGTTTCAA
CAAGCAGACC CAGCTTATGC AGCTTATGCT GAAGGGCGTT GTGATGGGAT GACTTCTGAT
AAGTCTCAAT TATTGAGTCG TCGTAGTACT CTACCAAGTC CAAATGATCA TGTTATTCTA
CAGGTCACTA TGTCCAAAGA GCCTTTAGGT CCAGTCACAA AAAATAATGA TTCTGCTTGG
TTTGACGTGG TTAAATGGGT GACTTATGCT TTAATAGAAG CTGAAGAGTT AGGTATTACT
CAAGAAAATG TAGATGACTT GAAGCAAAAT TCTGATAACC CTACTATAAG GCGCTTTTTA
GGAGTAGATG GAGACCTGGG TGAAGGTTTG GGTTTAAGCA ATGATTTTGC TTATAGAGTA
ATTAAGAATG TTGGAAACTA CGCTGAAGTC TATGATCGTA ACTTAGGAGA AGAATCTCAG
TTTAAGTTAC CTCGGGGTAT GAATAATTTA TGGACGAAGG GTGGTTTGCT TTATTCTCCT
CCATTCCGTT AG
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| Protein sequence | MIIPITACEV EGTSDQKEVT QENKQVTSRL DIVKNRGKLI CGVEGGIPGF SFVDKNGNYS
GIDVDICKAV AAALFNDPNL VEYRNLDSTE RFTALNGGEV DMLSRNTTWT VSRDTTVGLE
FAPTTFYDGQ GMMVRANSGV ESLEDLQGKS ICVEAGTTTE LNLTDNLRQR NVTAETLTFQ
QADPAYAAYA EGRCDGMTSD KSQLLSRRST LPSPNDHVIL QVTMSKEPLG PVTKNNDSAW
FDVVKWVTYA LIEAEELGIT QENVDDLKQN SDNPTIRRFL GVDGDLGEGL GLSNDFAYRV
IKNVGNYAEV YDRNLGEESQ FKLPRGMNNL WTKGGLLYSP PFR
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