Gene Tery_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1958 
Symbol 
ID4244382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3035691 
End bp3036203 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content35% 
IMG OID638107077 
Productferric uptake regulator family protein 
Protein accessionYP_721684 
Protein GI113475623 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0491085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00899541 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTCTTT ACACACCATC TTCATTTAAA GCAGAACTAA ATGAAAAAGG TTGGCGAATG 
ACTCCTCAAA GGGAGACAAT TTTGCACATT TTTCAAAACC TGCCAAAAGG CAATCATCTG
AGTGCCGAAG ATCTTTATAA CATGTTAAAA AATAGGGGTG AAAGAATTAG TCTATCCACC
ATTTACAGAA CCTTAAAATT AATGGCAAGG ATGGGAATTC TACGAGAACT AGAATTAGCA
GAAGGGCATA AACATTATGA AATAAATCAA CCTTACCCTC ATCATCACCA TCATCTTGTT
TGTGTACAAT GTAATAAAAC TATTGAATTT AAGAATGATT CTATTTTAAA AATAGGTCTC
AAACAAGCCG AAAAATCAGG ATTACATCTT TTAGATTGTC AGTTAACTAT TCATACAATT
TGCTATGAAG CCCTAAGAAA GGGATGGCCT TCCCTAGTTT CTTCTGATTG CTATTGCCCA
CGAGCACTTG CAGATAAAGA AAACTGTGAA TAG
 
Protein sequence
MALYTPSSFK AELNEKGWRM TPQRETILHI FQNLPKGNHL SAEDLYNMLK NRGERISLST 
IYRTLKLMAR MGILRELELA EGHKHYEINQ PYPHHHHHLV CVQCNKTIEF KNDSILKIGL
KQAEKSGLHL LDCQLTIHTI CYEALRKGWP SLVSSDCYCP RALADKENCE