| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1932 |
|---|
| Symbol | |
|---|
| ID | 4242681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 2996534 |
|---|
| End bp | 2998090 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638107053 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_721660 |
|---|
| Protein GI | 113475599 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03183] putative sulfurtransferase DndC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0230474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0642464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTA CACAACAATC TTTATTTCCA AGCAGAACTA CTACCCAATT AGTAGAAGAT
ATAAAAAAGC TAACTACAGA AATTCAAGAA CTATATTGTT TAGATTCTAT TCCCTGGGTT
ATTGGATATT CAGGGGGTAA AGATAGTACC GCAACATTGC AGCTTATATG GAATGCGATC
GCCGAACTTC CCCAAAAAAA ACGAATTAAA ACTATCCACG TTATTACCAC AGATACATTA
GTAGAAAATC CCATTGTTTC TGCTTGGGTA ACTAACTCTT TACAGTTGAT GAAAGAGTCT
GCAAAAAATC AGAAACTACC TATAGAATGT CATTTATTAA AACCAGCAGT TAAACAAACA
TACTGGGTAG GACTACTTGG TAAAGGATAC CCAGCTCCAC GTCATACATT TCGCTGGTGT
ACTCCCCGTT TAAAAATAGA TCCATCCAAT CTTTTTATTC GTAATGTTGT TAGAAATAAT
GGGGAAACAA TAGTTGTTTT AGGAACTCGT AAAGCAGAAA GTGCTAATCG TTTAGCAATA
ATGAATAAAC GAGAAATTGG TAGATTAAGA AACCATCTAA GCCCTCATCC TAGTCTCCTT
AATTCTTTGC TTTATACTCC TATTGAAGAC TGGCGAACTG ATGAAGTTTG GCTATATTTA
ATGCAATGGG AAAATCCTTG GGAAAATAGT AATAAAGATT TACTAGCAAT GTATCGAGGT
GCAACAGAAG ATAATGAATG TCCCTTAGTG GTTGATACCT CTACTCCTAG TTGTGGAAGT
TCTCGTTTTG GATGTTGGGT TTGTACCTTA GTAGATAGTG ATAAATCTAT GTCAGCAATG
ATTCAAAATG ATGAAGAAAA AGAATGGTTA CAACCTCTAA TAAATTTGCG TCAAGAACTA
GATATTTCTG ACAGAGATAA AAGAGATTTT CGGCGAATTT GGGGAAAAGT TCAACTCTTT
GAACGGAATA TAAATGGTGA AGTTTCTGTA GAACCAATAC CCGGTCCTTA CAAAAAAGAA
TGGCGAGATA CTTTACTTAG AAAATTGTTA GAAGCTCAAG CCAAAATTCG TGAAAATGCT
CCAGAAAATA TGCGAGGTAT TACTCTAATT TCTTCAGAAG AACTTAGTGA AATTAGACGC
ATATGGTTAG AAGAAAAACA CGAGTTTGAT GATAGTTTAC CTCGTATATA TGAAGAAGTA
ATAGGAGAAG AATTTCAAGA CTGTCGTCCT GGTACAGGAA TGAGTCTTTT AGGTAGTGAT
GAATGGTCAG TATTAGAAGA AATATGTAAT CAGGATGAGA TGCATCTTGA ACTTATGGCA
AAACTGTTAG ACACAGAACG GCAATATTAT ATTAAGTCTC ACCGGTATAA GATTTATGAA
AGTCTTGAAC AATGTTTTGA AACAAGTTCT CGTTCTAAGG AAGAAGCTAT TCAAAATGCT
CATAATAAAA GAGACCTCAA AGAAGCTGTT GATAGAGGAA AAGTTTCAGA AAAAATCAAA
CAATTAAGTT GGGCAAATAT GAAGTTTTCT CGTCAAATTT CGGCAGATAC TGAGTGA
|
|---|
| Protein sequence | MKGTQQSLFP SRTTTQLVED IKKLTTEIQE LYCLDSIPWV IGYSGGKDST ATLQLIWNAI
AELPQKKRIK TIHVITTDTL VENPIVSAWV TNSLQLMKES AKNQKLPIEC HLLKPAVKQT
YWVGLLGKGY PAPRHTFRWC TPRLKIDPSN LFIRNVVRNN GETIVVLGTR KAESANRLAI
MNKREIGRLR NHLSPHPSLL NSLLYTPIED WRTDEVWLYL MQWENPWENS NKDLLAMYRG
ATEDNECPLV VDTSTPSCGS SRFGCWVCTL VDSDKSMSAM IQNDEEKEWL QPLINLRQEL
DISDRDKRDF RRIWGKVQLF ERNINGEVSV EPIPGPYKKE WRDTLLRKLL EAQAKIRENA
PENMRGITLI SSEELSEIRR IWLEEKHEFD DSLPRIYEEV IGEEFQDCRP GTGMSLLGSD
EWSVLEEICN QDEMHLELMA KLLDTERQYY IKSHRYKIYE SLEQCFETSS RSKEEAIQNA
HNKRDLKEAV DRGKVSEKIK QLSWANMKFS RQISADTE
|
|---|
| |