| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1748 |
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| Symbol | |
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| ID | 4242591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 2661209 |
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| End bp | 2663380 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638106872 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_721481 |
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| Protein GI | 113475420 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAA GCTCTTCACG CAATCCACGC ACCGCTATAG TTGCCCTCGG TAATCTGTCC
CCTTTTGGGA ATAAACTGGT TCAGGCAGGC TTAGTTAACA TTGAACAATT CCAACATTGC
CAAATTGAAA GCCGTAAGAC AGGCAAATCA CTGACAGATT TGGTCGAAGA TGCAATAGGA
CATCCCTTAC CGCCAGATTT AATTAGGCAT TATAAAAAGC AGCAGCTATT TGAATTGATG
ATTCTACATG GTGTAGCTAC TTTTGACCCA GAAATTACTC CAATACCACT AGAGCAGTTA
TGTTATTTAA TCGACAAGAT AATTCCTATT GAAACTTGTC GTCGGAATCA GATTATACCA
CTCTTTAGTC GCGAAACTGA TTTAGCAAAT CAGTTCGTCC AAATAGGAAA GATAAGTCAA
GAAAAAAGTT TAAAGGCACT GAGGCAAAGC AGTGATTCTG AAAGTAGTTT AGTTGATGAA
TTAGAAAAGT TTGCAGGAGA TTCATTACCA TCAAGTTTAA TGAAAGATTA TGAAAATCAG
CAACCATTTG TAATGATGGG AATGGTTAAT CCTCATAATC TTCAAGCTTT GGATGAGTTA
AAAAATATCT TGAGGTATCG TGGATTAACT TTACAACGCT TGGTTATTAC TAAACAAGAT
TATGAAAGTC TGATTAACTA TTACTTAGAG GAACAAAGCA AGAAGAATAT TGTTAAGGCA
AAAGAGGCAG AACAAAAAGA GCTAGAGTTA GAGTCTAATT TCTTTGAAAG TGATAATCAG
TTAGAGGAAG CTGATGATGA AAAAGAAGTA GAAGATATTG CTGAAAGTAT CTCTGCTGCT
GAGGATGCTC CTGTTATTAA AGCAGTAAAT ATTATTTTAG TAAAAGCACT GACTGAGGGT
GTATCCGATA TTCATGTCGA GCCACAAGAA GAGTTTATCA GAATCAGGAT GCGCAAAGAT
GGGGTATTAC AGGAATATTT CCGATTTCCG AAAAAGGTGA TTCCGGCTAT TACTTCACGA
TTTAAAATTA TTGCAAGTTT AGATATTGCA GAACGAAGGC AAGCACAAGA TGGTCGTATC
CGCAAAGTTT TTAAGGGGCG TACAATTGAC TTCCGGGTCA ATAGTTTGCC TAGTCGCTAT
GGTGAAAAAA TAGTCTTGCG GATTTTGGAT AGCTCTAGTA CCCAACTGGG GTTAGATAAG
TTAATCACAG ATAAAGCCAC TTTGGCAATG GTGAGGGAAA CTGCTAGTCG TCCATTTGGA
TTAATTCTGG TGACTGGGCC AACTGGTTCT GGTAAGTCTA CTTCTCTATA TTCGATTTTG
GCAGAACGAA ATGACCCAAG TATTAATATT AGTACGGCAG AAGACCCAAT AGAATATGCT
TTGCCGGGAA TTACTCAATG TCAGGTAATT AGGGAAAAGG ATTTAACTTT TGCGAATATT
CTACGGGCAT TTCTGCGACA GGACCCGGAT GTTTTACTAG TAGGGGAAAC ACGAGATAAG
GAAACGGCAA AAACGGCAAT TGAAGCTGCG TTAACAGGGC ACTTGGTTTT GACAACTCTA
CATACTAATG ATGCTGCCGG AGCGATCGCT CGTCTTGATG AAATGGGAGT GGAATCTTTT
ATGGTTTCAG CGTCTTTGTT GGGTGTAGTA GCACAACGCC TGATGCGTCG GGTTTGCAGT
AAATGTCGAA TAGAATATCA CCCTGAACCT GATGAGTTTC GTCGTTATGG TTTGGTTCCT
TCTCAAGAAA AAGATTTTAC ATACTATAAA GCAAATACTA TACCAATTGA CCAACGAGAA
GATTTAAAAC AAAGGGGAGA GTTATGTCCC AAATGTAATG GTATTGGTTA TAAAGGTCGT
GTAGGTGTTT ATGAGTTTAT GAAAATTACT GAGCGATTAC AAACTTTAAT TACTCAAAGG
GTACCGACGG AACAAATTAA GGAAGCTGCA GTAGAAGAGG GGATGAAGCC TCTGTTACAA
TATAGTCTGA ATTTGGTACG AGAAGGTTAT ACAACTTTTG AGGAGGTGGA ACGGGTAACA
TTTACTGATT CTGGTCTGGA GGCGGAAATG AAACGCTTGG CTAAACAAAA TCTAATATGT
AAGTGTTGTA ACGCTGAGTT ACAAGCAGAA TGGTTAGAAT GTCCTTACTG TATGACTCCT
CGCTTTGATT AG
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| Protein sequence | MAQSSSRNPR TAIVALGNLS PFGNKLVQAG LVNIEQFQHC QIESRKTGKS LTDLVEDAIG
HPLPPDLIRH YKKQQLFELM ILHGVATFDP EITPIPLEQL CYLIDKIIPI ETCRRNQIIP
LFSRETDLAN QFVQIGKISQ EKSLKALRQS SDSESSLVDE LEKFAGDSLP SSLMKDYENQ
QPFVMMGMVN PHNLQALDEL KNILRYRGLT LQRLVITKQD YESLINYYLE EQSKKNIVKA
KEAEQKELEL ESNFFESDNQ LEEADDEKEV EDIAESISAA EDAPVIKAVN IILVKALTEG
VSDIHVEPQE EFIRIRMRKD GVLQEYFRFP KKVIPAITSR FKIIASLDIA ERRQAQDGRI
RKVFKGRTID FRVNSLPSRY GEKIVLRILD SSSTQLGLDK LITDKATLAM VRETASRPFG
LILVTGPTGS GKSTSLYSIL AERNDPSINI STAEDPIEYA LPGITQCQVI REKDLTFANI
LRAFLRQDPD VLLVGETRDK ETAKTAIEAA LTGHLVLTTL HTNDAAGAIA RLDEMGVESF
MVSASLLGVV AQRLMRRVCS KCRIEYHPEP DEFRRYGLVP SQEKDFTYYK ANTIPIDQRE
DLKQRGELCP KCNGIGYKGR VGVYEFMKIT ERLQTLITQR VPTEQIKEAA VEEGMKPLLQ
YSLNLVREGY TTFEEVERVT FTDSGLEAEM KRLAKQNLIC KCCNAELQAE WLECPYCMTP
RFD
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