| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1292 |
|---|
| Symbol | |
|---|
| ID | 4242042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 1972786 |
|---|
| End bp | 1973562 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638106485 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_721096 |
|---|
| Protein GI | 113475035 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.418487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.181564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA ATTTACCACA ACTGCATCAT ATTTCTGGTT CTGATATTGC TGATCAGAGT
TTAGATGAAA TATCAACAAA AAGAAAGAGT AGAATTGTTA GTAGGTTCCT ATCTCCTGCT
TTGCAATTTT GGTTAAAATC ACAATTAGAA CAGGTAGAAC AATTAAAGGT TCATATTGAA
GGAGGTGATC GCCAAATTAT TACAGGTCAA ATCCCACGAG TTTCTCTTGC TGCTTCTAAT
GTCATTTTTC GAGGATTACA TTTGACTGAG GTGAAATTAT CTGCTACTGG TATTCGGATT
AATATTGGTC AAATTATCAG GGGAAAAAAA TTGAAAATCT TAGAATCTTT TCCTATATTT
TGTCAGATTA AATGTCTTCA ATCTGACTTT AATTCTAGTC TAAAATCTGG TCTTTTGTCT
CAGGCTATTG TTGATTTTTT AACCCCACTA TTACAGTCAG ATTTTATAGA ATGCCTAGAG
AAACCTATTC GATTGTATGA CCAAAAAGCT GAAATATTTA CAGGTCATCT TAGTCTGTTT
GCTAACTTTA TGTCTAAGTT TGATGAAAAA ATCCCAATAA ATTTACATAC TAGTTTAAAG
CTTGCTACTA GTTGTAAATT ATTGCTAGAA AATTTTGAAT TTCAAGTTTT ACAAAAGTCT
AATTATGACC TTTCAAATAC CATCAAAGTA GATTTAGGTT CTGATGTTAA ACTACAAGAA
TTAACATTAG AATCTGGTCA ACTTATTTGT CAAGGTAGCT TAATAGTTAA ATCCTAA
|
|---|
| Protein sequence | MNKNLPQLHH ISGSDIADQS LDEISTKRKS RIVSRFLSPA LQFWLKSQLE QVEQLKVHIE
GGDRQIITGQ IPRVSLAASN VIFRGLHLTE VKLSATGIRI NIGQIIRGKK LKILESFPIF
CQIKCLQSDF NSSLKSGLLS QAIVDFLTPL LQSDFIECLE KPIRLYDQKA EIFTGHLSLF
ANFMSKFDEK IPINLHTSLK LATSCKLLLE NFEFQVLQKS NYDLSNTIKV DLGSDVKLQE
LTLESGQLIC QGSLIVKS
|
|---|
| |