| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1142 |
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| Symbol | |
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| ID | 4244412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1798654 |
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| End bp | 1800735 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638106365 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_720977 |
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| Protein GI | 113474916 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.344888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00702994 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTTAC ACTCAACTAT AAATGAAAAT TCTTCTCAGA TTTCAAACAA TACATTACTA
ACTAATATTT CTCAAACAGA TCAAACAGAA ATTAATGATA TCAAGTCTGA ACAAAAAAAA
TTATGGAGAA TTGAAGATAG TGAGAAGCTA TATAAAATAC TTGGTTGGGG CCATCCTTAT
TTTTCCATTA ATTCTGTTGG TCATGTAACA GTTTCTCCAA AGGGTGATTT AGGAGGTTCT
TTAGACTTAT ATGAACTTGT TGAGTCTATT AAACAAAGAA ATATAGGGCT GCCATTAATT
ATTAGATTTT CAGATATTCT TGAAGATAGA ATTGAAAGGT TAAATGCTTG TTTTTCTAAA
GCGATCGCTC GTTATAAGTA TAAGAATATA TATCGAGGTG TATTTCCTGT AAAGTGTAAT
CAAAATAGTC ATTTAGTAGA GGAAGTAGTT AAATTTGGCA AACCTCATAA ATTTGGTCTA
GAAGCAGGTT CAAAACCAGA ATTATTAATT GCTATAGCTA CTTTGAATAC AACGGACGGA
CTAATAATTT GTAATGGCTA TAAAGACAGA GAATATATTG AGACAGCAAT ACTAGCTCAA
AGATTAGGAA AAATACCAAT AATTGTTATT GAACAAGTAG AAGAAGTACA GTTAGTGATA
GAAGCTAGTC GAAAACTAAA TATTAAACCT GTAGTAGGAA TTCGGGTAAA ACTAAGTACT
AAAGGTATGG GTCGTTGGGC AGGAACTACA GGCGATCGCG CAAAATTCGG ATTGAATATT
CCTGAAATAA TTAAAGTTGT GAATCAGTTA AAAAGTACGG GTATTTTAGA TTCTTTACAA
CTCTTACATT TTCATATTGG CTCTCAAATT TCTTCAATTA GTGTAATTAA AGATGCTATT
AGAGAAGCAA GTCAAATTTA TGTAGAATTA GCTCAACTAG GAGCGAATAT GAAATATTTA
GATGTAGGGG GTGGTTTAGC AGTTGATTAT GATGGTTCTA AAAGCAATTT TTATGCTTCT
AAAAATTATG ATATGCAGAA CTATGCTAAT GATATTGTGG CAGAAGTTAA AGAAGCTTGT
GAAGAGAAAA ATATATTACC TCCAATATTA ATTAGTGAAA GTGGTAGAGC AGTCGCATCC
CATCAATCAG TTCTAGTTTT TGATGTATTA GGAGTTAGTC AAATTCCGAA AGAAGAACCA
CCAGTTATTG GCAAAGGCGA ACATTTAATT TTGCAAAACC TTTATGAAAC GTATCAATCT
ATTAACAAAG ATAATTATCA GGAAGCATAT CATGACGCAA TTCAATTCAA AGAAGAATCT
ATTAGTATAT TTAATTTTGG ATATCTTAGT ATTAGTGAAC GAGCAAAAGT AGAGCAACTA
TATTGGGGAT GTTTGAGAAA AATTCAAGAA ATACTAAAAA GCTCTGAATA TATTCCAAAT
GATCTGGAAG AACTAGAGAA AGTCATGGCA TCTATTTACT ATATTAATCT TTCTGTTTTT
CAATCTGCTC CTGATAGTTG GGCAATTAAT CAATTATTTC CAATTATGCC TATACATAGA
TTAGATGAAG AACCTACTGA AAGAGTTATA TTAGCCGACC TTACCTGCGA TAGTGATGGA
AAAATTGATC GATTTATTGA TTTGCGAGAT ATAAAATCAT TACTAGAATT ACACCCTCTT
CAAGTTAGTA ATAAATCTTC CCAATATTCT CCTATTCAAA AACTAGAAAA TTCTACTACA
GAAATTATTT CTGTTTTTGA ACCTTACTAT TTGGCAATGT TTCTTGGAGG TGCATACCAA
GAAATAATGG GTAATCTCCA TAATTTGTTT GGTGATGTCA ATGTTGTACA TATTAAATTA
AATCCTTCTG GCTACAAAAT TGAACACGTT GTTAAAGGTG ACACAATGAC AGAAGTATTG
AATTATGTTC AGTATAATTC TGATGATCTA GTGGAAAATA TTCGCTGTCA AACTGAGCAA
GCTTTACAAG AAGAAAAAAT TACCCTTAAA GAATCACGAA TGCTGCTACA AAATTATGAG
AGTAGTCTCA GTAGTTACAC TTATTTAAGT TTAAGTAACT AA
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| Protein sequence | MDLHSTINEN SSQISNNTLL TNISQTDQTE INDIKSEQKK LWRIEDSEKL YKILGWGHPY
FSINSVGHVT VSPKGDLGGS LDLYELVESI KQRNIGLPLI IRFSDILEDR IERLNACFSK
AIARYKYKNI YRGVFPVKCN QNSHLVEEVV KFGKPHKFGL EAGSKPELLI AIATLNTTDG
LIICNGYKDR EYIETAILAQ RLGKIPIIVI EQVEEVQLVI EASRKLNIKP VVGIRVKLST
KGMGRWAGTT GDRAKFGLNI PEIIKVVNQL KSTGILDSLQ LLHFHIGSQI SSISVIKDAI
REASQIYVEL AQLGANMKYL DVGGGLAVDY DGSKSNFYAS KNYDMQNYAN DIVAEVKEAC
EEKNILPPIL ISESGRAVAS HQSVLVFDVL GVSQIPKEEP PVIGKGEHLI LQNLYETYQS
INKDNYQEAY HDAIQFKEES ISIFNFGYLS ISERAKVEQL YWGCLRKIQE ILKSSEYIPN
DLEELEKVMA SIYYINLSVF QSAPDSWAIN QLFPIMPIHR LDEEPTERVI LADLTCDSDG
KIDRFIDLRD IKSLLELHPL QVSNKSSQYS PIQKLENSTT EIISVFEPYY LAMFLGGAYQ
EIMGNLHNLF GDVNVVHIKL NPSGYKIEHV VKGDTMTEVL NYVQYNSDDL VENIRCQTEQ
ALQEEKITLK ESRMLLQNYE SSLSSYTYLS LSN
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