| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0680 |
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| Symbol | |
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| ID | 4242819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 1110563 |
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| End bp | 1111246 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638105977 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_720590 |
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| Protein GI | 113474529 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0123656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGATT TCCCAAAAAT AACCCATATT ATCTACGACT TAGACGGTTT ACTTCTAGAT
ACAGAATCAA TTCATGCTCA AGTAAACCAA GAAGTAACAA GCCGTTATGG CAAAACTTTT
GACAAACATA TTAAATGTAA AATTACCGGC AGAAAATCTA TTGATTCTGC CAGAAAAATT
GTAGAACTAT TAGAACTACC TATCACTCCT GAAAATTATC TTCAGCAAAG AAATCTTCTC
ACATATAAAC GCTTTCCTCA AGCCAAACCA ATGCCAGGTG CAATTAGCCT TACTCAACAT
TTATCTCAAA ATAAAATTCC TCAAGCTGTA GCCACCAGTT CTTACCGTGA ACCATTTAAT
TTAAAAACAA AAAATCATCA AGAATGGTTC CAATTATTTG ATTATATTGT TGTAGGAGAT
GACCCCAATA TCCAACATGG AAAACCAGCC CCAGATATAT TCTTAATAGC CGCTCAAAAA
TTAGAAGTTT CTCCAGAAAA ATGTTTAGTA TTTGAAGATT CTTTAGCAGG TATGGAAGCT
GCTTTAGCCG CTAGAATGTC TGTAGTTGTT GTTCCCGATC CTGACATGGA TAAAAACTTA
TTTCATTCTG CTCATCAAAT TCTCAATTCC CTCACAGAAT TTCAACCCCA TTTGTGGCAA
CTACCATCGT TTTTATCAAC ATAA
|
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| Protein sequence | MNDFPKITHI IYDLDGLLLD TESIHAQVNQ EVTSRYGKTF DKHIKCKITG RKSIDSARKI
VELLELPITP ENYLQQRNLL TYKRFPQAKP MPGAISLTQH LSQNKIPQAV ATSSYREPFN
LKTKNHQEWF QLFDYIVVGD DPNIQHGKPA PDIFLIAAQK LEVSPEKCLV FEDSLAGMEA
ALAARMSVVV VPDPDMDKNL FHSAHQILNS LTEFQPHLWQ LPSFLST
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