Gene Tery_0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0510 
Symbol 
ID4242358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp812932 
End bp814077 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content40% 
IMG OID638105824 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_720438 
Protein GI113474377 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTT TAGTTACGGG TATTGGGCTA ACTTCTAGTT TGGGAAACCT CTTTCAAAGT 
TGGGAAAAAC TACTTGATGG TAAGTCTGCT ATTCGGTTAG TTAAACCTTT TGCAGAATTA
CCTCCCCTAC CTTTGGGTTT AATTAATTCT CAGCCTGTAG ATTTAACTAA CTTAATTAAG
CAAACTGTGG AAACTGCTGT CAAGTCTTCC GGTCTGAAGC TTCCATTACC TGAATGTGGT
GTCGTTATTG GTTCGAGCCG TGCCTATCAA AGAATGCTAG AAAATTTAGC CAAAAAGCAG
TTTGTTGATG ATGGTCAGGA TCATAGTCAA AAAGATTATG GATCATTTAT TAATTTTTGG
CCTCATCAGC CTGCTATTTT AACTGCGAGT CAGATAGGTA CAAAGGGCAC TGTTTTGTCT
CCAATGGCAG CCTGTGCTAC AGGAATATTA GCGATCGCTC GTGGTTTTGA ATTAATTCAG
ACTGGCCAAT GTCAACAGGT TATAGCGGGT GCTGTTGAAT CTCCTATTAC ACCTCTTACT
ATAGCAGGAT TTAGAAAAAT GGGAGCCTTA GCTCAAATAG GTGCCTATCC TTTTGACCGA
GCTCGAGAAG GATTTGTTTT GGGGGAAGGA GCAGCTATTT TGCTACTAGA GTCTGCTAAT
TTTGCTAAGA AAAGAAGTGC TAAAGTTTAT GGTCAAATTC GCAGTTTTGG CTTGACAAAT
GATGGAATTC ATAGTGTAAT TCCTGATTTG AGTGGTAAAA GTGCAATGTT AGCGATCGCT
CGATCTTTAG CAAGAAGTGG TTTAGCTCCT GAAGAAATTG ACTATGTTCA TGCTCATGGA
ACGGCAACTA AATTAAATGA TCGCCATGAA GCTAATTTAA TTCAGCAAAT TTTTCCTCAC
AAAGTAGCAG TTAGTTCGAC AAAGGGGGCG ACTGGTCATA CTTTGGGAGC ATCTGGAGCA
TTAGGTGCTG CATTTTGTTT GATGGCGGTC AAACATCAGG TTTTACCTCC CTGTGTTGGT
TTGAATTCAC CAGAATTTGA CCTAGACTTG GTTAGGTATG CTCGTCAGTC TCAGGTGAAA
AATGTTTTAT GTTTGAGTTT TGGGTTTGGG GGTCAAAATG CCGCTTTAGT TTTAAGTAAG
GTGTAG
 
Protein sequence
MKVLVTGIGL TSSLGNLFQS WEKLLDGKSA IRLVKPFAEL PPLPLGLINS QPVDLTNLIK 
QTVETAVKSS GLKLPLPECG VVIGSSRAYQ RMLENLAKKQ FVDDGQDHSQ KDYGSFINFW
PHQPAILTAS QIGTKGTVLS PMAACATGIL AIARGFELIQ TGQCQQVIAG AVESPITPLT
IAGFRKMGAL AQIGAYPFDR AREGFVLGEG AAILLLESAN FAKKRSAKVY GQIRSFGLTN
DGIHSVIPDL SGKSAMLAIA RSLARSGLAP EEIDYVHAHG TATKLNDRHE ANLIQQIFPH
KVAVSSTKGA TGHTLGASGA LGAAFCLMAV KHQVLPPCVG LNSPEFDLDL VRYARQSQVK
NVLCLSFGFG GQNAALVLSK V