Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0457 |
Symbol | |
ID | 4243751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 724335 |
End bp | 725195 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638105774 |
Product | zinc finger, SWIM-type |
Protein accession | YP_720388 |
Protein GI | 113474327 |
COG category | [S] Function unknown |
COG ID | [COG4279] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.717379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAATT ACACAAGCTT ACACAGTGAT AAAGAATGGT GGACTCAGCA ATGGATAGAT TTGTTAAATT CTTATCGGTA TAAAAAACGA TTAGAACGAG CTAGAAATTA TGCTCGGCAA GGCAATGTTC TCAGCTTAGA ATTTAAGGAT CAAAAAATTA TTGCTGAAGT TCAAGGTACA GCACCTGAAC CCTACAAGTT ATTTTTATGG TTAGATACTT TTACTGATGA AGACTGGAGT TATATTATTC AAACTATGTC AGAAAGAGCA ATTTTTACTG CTAAATTATT GGCTGGAGAA ATGCCTCAAG ATATAGAAGA AGTTTTTGCT GCTAATGGTT TAAGATTATT TCCTTTTACA TTAGATGAAA TTCATTCTAA ATGTAGCTGC CCAGACCCAG CTAAAGTTTG TAAACATATT GGAGCAGTTT ATTATTTATT AGGCGATCGC TTCAGTGATG ACCCATTTTT ATTGTTTCAA TTAAGGGGTC GTACTAAAGA AAGAATTTTA GAAGAATTAC GTCAAAAACG TGGTCAAAGT GAAGATGAAA AAGTTCCAGA AGCGAAAAAT TTTAAGTCTA AAAAAACCAA GGTTTCGGAT TCCTTAACTG TGGCTTCAGC TACTCAAGAA TCTCTAAGTT TTGAGAATTT TTGGCAATAT AATCAACAGT TAGATCCTTC CTTAGTAGTG ATTAGTCCAT CCCCTAGTAA TGAAATAGTT TTAGATGTTT TGGGGGATGT TCCTTTCGGT TCATCTGCTA ATGTTGTTAT GAATTATTTC CAGAAAATTT ATCAGAATAT TAGTCAACAG GCGGTAATGA CAGCGTTAAA CCAGGGAGAA GATAAAAAAA GAGGTTTTTA A
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Protein sequence | MTNYTSLHSD KEWWTQQWID LLNSYRYKKR LERARNYARQ GNVLSLEFKD QKIIAEVQGT APEPYKLFLW LDTFTDEDWS YIIQTMSERA IFTAKLLAGE MPQDIEEVFA ANGLRLFPFT LDEIHSKCSC PDPAKVCKHI GAVYYLLGDR FSDDPFLLFQ LRGRTKERIL EELRQKRGQS EDEKVPEAKN FKSKKTKVSD SLTVASATQE SLSFENFWQY NQQLDPSLVV ISPSPSNEIV LDVLGDVPFG SSANVVMNYF QKIYQNISQQ AVMTALNQGE DKKRGF
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