Gene Tery_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0311 
Symbol 
ID4242913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp480768 
End bp481508 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content35% 
IMG OID638105646 
ProductOmpA/MotB 
Protein accessionYP_720261 
Protein GI113474200 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG CTTTTCAATA TCCCTCTACT TCTCAAAAGG TACCCATAGC AGAAAAACTC 
CTTAATAATT TTAAGAGTAG AGTATCTGAA AAACAGTTGC CCCTAGTTTC AACTACTCCT
CCTGCACCTA TTTTAGAAAC TATAAAACCC CGCGTTCAAC TCACTGAGGC AGAAAAAATT
GAGTTAGAAA CAGAACTGAA ACAATTACAA GCACAGCTCA AAACTCTTAT TGTTCGTACT
ACAGCTATAG AAAATAAACT AAATATCACT AGAGGTGATA TAGATCTAGA AACCAGGTTA
AATATAATTG CTCAAGAGTT AGCTGCTCCC CCTTCTGCAA ATAAAAATAA ACAGAGAAAT
CAATATTCTT CACCAGTTTT GACTAAAGCT GACATGGTGA CTCTTCCTAG CGATATTTTG
TTTGAGTCGG GTAGTAATAA AATTCGTTTT GATGGCAGAG TTATTGTAGA TAATTTAATT
CGTGAATTGA GAAATTATCA AGATGTAATA ATTAGCGTTT CTGGTTATAC TGATAATAGA
GGAAAAGCAA AAGTCAATCT AGAAAAGTCA TTTTTACAAG CTGAAGTAAT AGCAGAATAT
TTATCAAAAA AATTAGGTCA GGGTTATCGT CTGTTAGCTA TTGGTTATGG AGAGTCTCGC
CCCATCGCAG AAAATGACTC TCAGACTAAT AGACAACGTA ACCGTCGCAT AGAGGTGAAA
GTACATCTGA GAAAAAGGTA A
 
Protein sequence
MAIAFQYPST SQKVPIAEKL LNNFKSRVSE KQLPLVSTTP PAPILETIKP RVQLTEAEKI 
ELETELKQLQ AQLKTLIVRT TAIENKLNIT RGDIDLETRL NIIAQELAAP PSANKNKQRN
QYSSPVLTKA DMVTLPSDIL FESGSNKIRF DGRVIVDNLI RELRNYQDVI ISVSGYTDNR
GKAKVNLEKS FLQAEVIAEY LSKKLGQGYR LLAIGYGESR PIAENDSQTN RQRNRRIEVK
VHLRKR