| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0246 |
|---|
| Symbol | |
|---|
| ID | 4241883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 384785 |
|---|
| End bp | 385255 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638105589 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_720205 |
|---|
| Protein GI | 113474144 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3803] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.314293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00240623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGACAAGGG TTTGGGAGTC TATAAATAAG TCTAACATTT CTAATTGGAC AGTTTCTCTA
GTAGGGAAAC TTGCTTTAGT CATTGTGTTA GATCAATTCT CTCGAAATAT GTTTAGAAAT
TCACCAAGAT CATTTGAGAA AGACTCTTTT GCTCTAGAAT TAACTCTATG TGGGCTGGAG
CAAAAAATGG ATCAACAATT CAAACAAATT GAGCGTCAAT TTTTCTATAT GCCTTTGATG
CATTCTGAGA ATATAGAGCA TCAAAAAATA TCTATCCAAT GTTTTGAAAG GCTTGTGGCA
GAAAGTACTG GTTCTCTTCA AGACAGGTTT AAAAATACCT TACGTTATGC ACATCTTCAT
GAAGAAATTA TTCAACGTTT TGGTAGATAT CCACATCGAA ATGAGATACT TGGGAGAAAG
TCAACGTCAG AAGAAGTTGT ATTTCTCAAG CAGCCTCATT CTAGGTTTTA G
|
|---|
| Protein sequence | MTRVWESINK SNISNWTVSL VGKLALVIVL DQFSRNMFRN SPRSFEKDSF ALELTLCGLE
QKMDQQFKQI ERQFFYMPLM HSENIEHQKI SIQCFERLVA ESTGSLQDRF KNTLRYAHLH
EEIIQRFGRY PHRNEILGRK STSEEVVFLK QPHSRF
|
|---|
| |