| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0214 |
|---|
| Symbol | |
|---|
| ID | 4241810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 325107 |
|---|
| End bp | 326174 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638105559 |
|---|
| Product | GHMP kinase |
|---|
| Protein accession | YP_720176 |
|---|
| Protein GI | 113474115 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0153] Galactokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0700927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.111663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTT TTGTACCAGG TCGCCTTTGT TTATTTGGAG AACATAGTGA TTGGGCAGGA
GGGTATCGTT CTATGAACCC CCAAATAGAT AAAGGCTATA CAATTGTAGT AGGAGTTGAT
CAAGGAATTT ATGCAGATGT CAAACCCCAT CCTACTCATT TAATTATCAA GACAACTTTG
AATAATGAAA GTCTGATACA GTCGTTTAAT TTGCATAAGC ATAAAGAAAT ATTATTAGCA
GAAGCTCGTC GGGGAGGAGT TTTTAGTTAT GTAGCTGGGG TTGTATATCA AGTTATTAAT
AATTATTCAG TAGGTGGTTT AGAAATAGAT AATTATTTCA CAGATTTACC AATTAAAAAG
GGTCTATCAT CAAGCGCGGC TATTTGTGTA TTGGTGGCTA GAGCTTTTAA CCTATTGTAT
GATTTAAAAC TAAATATTCG TTCGGAAATG GAGTTAGCTT ATCAGGGGGA AGTTACTACT
CCTTCTCGTT GTGGCAAGAT GGACCAAGCT TGTGCTTATG GTAAGCAAGC AATTATGATG
ATATTTGACG GGGAAAAAAC GGATATTATT GAACTTAATC CACCAAAAAA AGATTTATTC
TTTGTTATTG TTGATCTAGG CGCGAGCAAA GATACTCAAG AGATATTGAC TAGATTAAAT
AAATGTTATA TAGAAGAAGC TAATAAAGTA AATGAGAATG TACAATATTA TCTTGGAGTT
ATTAATGCTG ATATTACTAA ACAAGCAGCA TTAGCCTGGC AAAAAGGGGA TGGAGAAAAA
ATTGGTAGTT TGATGCTCAA AGCACAAATT GAATTTGATA AATATATGAT ACCAGCTTGT
CCTTCACAAT TAACATCTCC AGTACTCCAT TTATTACTAA ATTATTCACG TCTCCAAGAA
TATATTTGGG GTGGTAAAGG AGTTGGTTCT CAAGGTGATG GAACAGCTCA ATTCATTGCT
AAAGATGAGA ATAGTCAACA GAAGTTAATT GAAATAATTA ACCTAGATTT TCCTAAAATG
CAATGTTTTA AATTAGTAGT TAGGGCTGAA TATAGCAATT CTAAATGA
|
|---|
| Protein sequence | MKLFVPGRLC LFGEHSDWAG GYRSMNPQID KGYTIVVGVD QGIYADVKPH PTHLIIKTTL
NNESLIQSFN LHKHKEILLA EARRGGVFSY VAGVVYQVIN NYSVGGLEID NYFTDLPIKK
GLSSSAAICV LVARAFNLLY DLKLNIRSEM ELAYQGEVTT PSRCGKMDQA CAYGKQAIMM
IFDGEKTDII ELNPPKKDLF FVIVDLGASK DTQEILTRLN KCYIEEANKV NENVQYYLGV
INADITKQAA LAWQKGDGEK IGSLMLKAQI EFDKYMIPAC PSQLTSPVLH LLLNYSRLQE
YIWGGKGVGS QGDGTAQFIA KDENSQQKLI EIINLDFPKM QCFKLVVRAE YSNSK
|
|---|
| |