| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0116 |
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| Symbol | |
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| ID | 4245507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 158094 |
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| End bp | 158963 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638105467 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_720086 |
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| Protein GI | 113474025 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.75872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCAT CTTTCAAAGA AGTCGCTGTG GCTCAAAAAA ATATGGAAAT GGGCAAACAG
CTTAAAGAGA AGGGTTCGTT CAAAGAAGCG ATCGCCAAAT ACAATATGGC CCTTAAACTA
ACCCCAGACA ACATACAGGT TTTGAACCAG TTGGCTTCGA TTTATGAAGC CCAAGAAAAC
TGGGAAGAAG TAGTCAAATG TTGCAGAAAA ATTGTGGCTT TCCAACCCAC TAATGCTAGG
GCATATCTCC GACAGGCCAG AGCTCTAAAA CAACAAAATA AACTCTATGG GGCAATAGCT
GCGTTTCAAG AAGCCATTGA AATAGACAAA GACATACTTA AAGCCCAAGA CTACAAGCAA
TTAGGAGATA TATTTGTTCA ACTAAAAAGC TCTGAAAACC AAAAAGCTCT GGCTAATGAT
GCGATCGCGA CTTATAAAAA AGCTGTGGAA CTGAAACCTG ATTTCCCCCC ACAGGTTCAT
ATTAGCTTGG CTGACACTCT GCAAAAACAG GAACGCTTTG AGGAAGCTAT TGTTTCATAT
CAAAAAGCAT TAGAAGTAAA ACCAGATTTG GGTGCAGGGG TCTATACTAA GTTAGGGAAA
GCCCAGCTCA AACAGGGGCA ACTAGACGAA GCGATCGCTA CTTATCAAAA AGCAATTGAG
TTAGATCCGA GTTCTGTAGC TGCTTACCAA AATCTGGGGA ATGCTTTACA ACAAAAAAGC
TTATTCAATG ATGCAATCAA TTCTTATCAA AAGGCGATAG AACTCAATCC AAATGCTCCC
GGTTTATATC GTTTGATGGG CGATTTAATG ACAAAACAAG GTCGGACGAC TGAAGCTGAT
CAATATTACC AAAAAGCTAC TTCAATTTAG
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| Protein sequence | MSSSFKEVAV AQKNMEMGKQ LKEKGSFKEA IAKYNMALKL TPDNIQVLNQ LASIYEAQEN
WEEVVKCCRK IVAFQPTNAR AYLRQARALK QQNKLYGAIA AFQEAIEIDK DILKAQDYKQ
LGDIFVQLKS SENQKALAND AIATYKKAVE LKPDFPPQVH ISLADTLQKQ ERFEEAIVSY
QKALEVKPDL GAGVYTKLGK AQLKQGQLDE AIATYQKAIE LDPSSVAAYQ NLGNALQQKS
LFNDAINSYQ KAIELNPNAP GLYRLMGDLM TKQGRTTEAD QYYQKATSI
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