Gene Tery_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0108 
Symbol 
ID4243049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp147658 
End bp148572 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content37% 
IMG OID638105461 
ProductAp4A phosphorylase II 
Protein accessionYP_720080 
Protein GI113474019 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4360] ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA ATCAACTTTT ATTAGCATCA GGTACTCTCA CAGAAAGACT CAAACAACAA 
ACTAAATATG CTCTCTATTG TGGCGCACTC CAACCGATAC CCACAGAATA TGAATTTGTG
GAACAGGATA ATATTCGCTT TGTGGTGCGC ATTTTGTCTA ATTTATCGGG TAAAGAGCAA
GCTAGAAAAC AGCAGGAAAA AAATATTATT GTTACTGGCC AAGATTTTAA CCCTTTTCTA
CCTTATGAGA AAGACTTATT TGTTGCAGAC ATCTCTACAA CTCATCTGTG TCTGTTGAAT
AAATATAATG TTGTTGATTA TCATTTACTT ATTGTTACTA GAGAATTTGA GGAACAAGAA
AGTTTACTTA ATTTGCAAGA TTTTCAAGCT TTGGGTAGTT GTATGGGAGA GTTTGAAGGT
TTAGCTTTTT ATAACGGTGG TAAAACTGCG GGTGCGAGTC AACGTCATAA ACATTTGCAG
GTAGTTCCTC TTCCTATGAT ACCTAGTGGA GAGAAAATAC CGATAGATAG AGCGATCGCT
ACTGCTAAGT TTAATAACGG GATAGGTATT ACGTCACAAT TTCCTTTTAG ACACGCTATA
GCTAAGTTAG ATGTTGCTTG GGTGCATTCT CCGGTTGAGT CTGCTGCTGA AATACTGGAA
TTTTATTTGA CTTTGCTCAA GGCAGTGGGG ATAGAAAGTC GTGATGGAAT GAATGGGAAA
CAGTCTGGTC ATTATAATCT TTTGGTAACG GGAGAATGGA TGTTAGTTGT GCCGCGATCA
TATGAATATT TTCAGTCTAT TTCTGTAAAT AGTTTGGGTT TTGCAGGTGC TTTGTTGGTA
AAAAACCAGG AACAAATGAA TATTATTAAG GAGCAGAAAC CTTTAACTAT TCTGCGTCAT
GTTGCTGCTG GGTAA
 
Protein sequence
MSENQLLLAS GTLTERLKQQ TKYALYCGAL QPIPTEYEFV EQDNIRFVVR ILSNLSGKEQ 
ARKQQEKNII VTGQDFNPFL PYEKDLFVAD ISTTHLCLLN KYNVVDYHLL IVTREFEEQE
SLLNLQDFQA LGSCMGEFEG LAFYNGGKTA GASQRHKHLQ VVPLPMIPSG EKIPIDRAIA
TAKFNNGIGI TSQFPFRHAI AKLDVAWVHS PVESAAEILE FYLTLLKAVG IESRDGMNGK
QSGHYNLLVT GEWMLVVPRS YEYFQSISVN SLGFAGALLV KNQEQMNIIK EQKPLTILRH
VAAG