Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2154 |
Symbol | |
ID | 3761319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2378345 |
End bp | 2378902 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637786903 |
Product | chorismate lyase |
Protein accession | YP_392416 |
Protein GI | 78486491 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAGC CTTCTAGGAC ACACCTTACA CTAAGACACG AACCTCACTG GATTCCCGCG GGACTGATTC ACCGATTAAA AAGCCCTAGG CAACTGCACG ACTGGTTATT AGATTCGAGT TCTTTGACAG CAAAAATTCG GATAGGCTGT CCAGAAATGG ACGTACGCAT CTTATCTGAA ACCTATGAAA AACCGCTTAT ATCAGAAGCG CACCACCTCA AAATACCTTT GTCTCAAAAA ACCTGGATAC GCTGTGTCTT TTTAATGTGC AACGGGCAAC CAATTGTCTA CGCCAGAACT GTAATACCCT ATTGGAAAAC AGGCAACCCA TGGTATGCGC TGAAACATTT AGGAAACCGC CCTCTTGGAG AGGTTTTATT CCAACTTCCC AACTTAAAAC GGACGCCGTT TCAAATTACA CAAACGCACG CCCAGAATTG GCCACACCTA GATTTGGAAG ATTCTAAACA AATCAAGACT TTTGCACGCA AATCAACCTT TATCCAAGGC AAATACCCAC TTTTATTAAC AGAAGCCTTC ATAGAAAGTT CGCTTTAA
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Protein sequence | MLKPSRTHLT LRHEPHWIPA GLIHRLKSPR QLHDWLLDSS SLTAKIRIGC PEMDVRILSE TYEKPLISEA HHLKIPLSQK TWIRCVFLMC NGQPIVYART VIPYWKTGNP WYALKHLGNR PLGEVLFQLP NLKRTPFQIT QTHAQNWPHL DLEDSKQIKT FARKSTFIQG KYPLLLTEAF IESSL
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