Gene Tcr_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2154 
Symbol 
ID3761319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2378345 
End bp2378902 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content43% 
IMG OID637786903 
Productchorismate lyase 
Protein accessionYP_392416 
Protein GI78486491 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGC CTTCTAGGAC ACACCTTACA CTAAGACACG AACCTCACTG GATTCCCGCG 
GGACTGATTC ACCGATTAAA AAGCCCTAGG CAACTGCACG ACTGGTTATT AGATTCGAGT
TCTTTGACAG CAAAAATTCG GATAGGCTGT CCAGAAATGG ACGTACGCAT CTTATCTGAA
ACCTATGAAA AACCGCTTAT ATCAGAAGCG CACCACCTCA AAATACCTTT GTCTCAAAAA
ACCTGGATAC GCTGTGTCTT TTTAATGTGC AACGGGCAAC CAATTGTCTA CGCCAGAACT
GTAATACCCT ATTGGAAAAC AGGCAACCCA TGGTATGCGC TGAAACATTT AGGAAACCGC
CCTCTTGGAG AGGTTTTATT CCAACTTCCC AACTTAAAAC GGACGCCGTT TCAAATTACA
CAAACGCACG CCCAGAATTG GCCACACCTA GATTTGGAAG ATTCTAAACA AATCAAGACT
TTTGCACGCA AATCAACCTT TATCCAAGGC AAATACCCAC TTTTATTAAC AGAAGCCTTC
ATAGAAAGTT CGCTTTAA
 
Protein sequence
MLKPSRTHLT LRHEPHWIPA GLIHRLKSPR QLHDWLLDSS SLTAKIRIGC PEMDVRILSE 
TYEKPLISEA HHLKIPLSQK TWIRCVFLMC NGQPIVYART VIPYWKTGNP WYALKHLGNR
PLGEVLFQLP NLKRTPFQIT QTHAQNWPHL DLEDSKQIKT FARKSTFIQG KYPLLLTEAF
IESSL