Gene Tcr_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2079 
Symbol 
ID3761260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2298008 
End bp2298925 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content42% 
IMG OID637786827 
Productphosphonate-binding periplasmic protein 
Protein accessionYP_392342 
Protein GI78486417 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA AGAACTTGTT GTTATCTGTT GTCGCCATTG CAACCTTAAC GCCTTTAGCC 
GCATTCGCTC TTCCTGATGG CTCAAAAGAA CACCCTTTAC GGGTATTGAT GATCCCGACT
GATACAGGCA CGAACGATAT CACTAAAGAT TATGGACCAG TTTTTCAAGG TATTACAGAA
AACTATGGTA TTCACTTTGA TATTAAAGCT GGCGCAAGTT ATGCGGCCGT TGTTGAAGGT
ATGTGTAACG ATCAAGCGGA TATTGCCTGG TTTGGCGCGG TTACTTATGG TCAAGCCAAT
GATAAATGTG GGGTTGATCT TTTAGCGGTT GATGTGAAAA AAGGAGATTC TTCCTATTAC
TCTGGTATTT TCGTCCGTAA AGACAGTGGC ATTAAAACGA TCGCTGACCT TAAAGGTAAG
AGCATGGCTT TTGGTAGCCC AAGTTCAACC TCTTCATTCA ACTTTCCAGT CGCCATGATT
ATTGCCGCAG ACGTTGATCC TGTTAACGAC CTTTCTAAAG TGATTATCAC TGGCTCTCAC
TCAGCTTCTA TAGCTGCACT TTCAGAAGGT AAAGTAGATG CCGCCGCCGC ATCCTACAAC
TCTTTTGGTA AAGCCGCCAA AAAAGGCGCT ATTGATCCTG CCCTATTTAT GCCTTTAGCT
AAATCTCAGC CAATCCCAAA CCCGCCTTTA GCTATGAACA AAAGTTTAAA TTCTAAGCTA
AAAGCAGAAC TTCGTAAGGC ATTTGGTGAA ATTCATACCA AAATTGATCC TTCAAAAATC
CGCGGTTACG GTGGCAAAAA AGTCGATCGT TATGACACTG CATTTGATGA GCAAAAAATC
TTTGATGCTT TGAAAAAGCT GAATGCTGTC ACACATGAAT TAAAAGGTGA ACTGCTAGAA
AAAGCAGGTC AGCGTTAA
 
Protein sequence
MKLKNLLLSV VAIATLTPLA AFALPDGSKE HPLRVLMIPT DTGTNDITKD YGPVFQGITE 
NYGIHFDIKA GASYAAVVEG MCNDQADIAW FGAVTYGQAN DKCGVDLLAV DVKKGDSSYY
SGIFVRKDSG IKTIADLKGK SMAFGSPSST SSFNFPVAMI IAADVDPVND LSKVIITGSH
SASIAALSEG KVDAAAASYN SFGKAAKKGA IDPALFMPLA KSQPIPNPPL AMNKSLNSKL
KAELRKAFGE IHTKIDPSKI RGYGGKKVDR YDTAFDEQKI FDALKKLNAV THELKGELLE
KAGQR