Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2079 |
Symbol | |
ID | 3761260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2298008 |
End bp | 2298925 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637786827 |
Product | phosphonate-binding periplasmic protein |
Protein accession | YP_392342 |
Protein GI | 78486417 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTA AGAACTTGTT GTTATCTGTT GTCGCCATTG CAACCTTAAC GCCTTTAGCC GCATTCGCTC TTCCTGATGG CTCAAAAGAA CACCCTTTAC GGGTATTGAT GATCCCGACT GATACAGGCA CGAACGATAT CACTAAAGAT TATGGACCAG TTTTTCAAGG TATTACAGAA AACTATGGTA TTCACTTTGA TATTAAAGCT GGCGCAAGTT ATGCGGCCGT TGTTGAAGGT ATGTGTAACG ATCAAGCGGA TATTGCCTGG TTTGGCGCGG TTACTTATGG TCAAGCCAAT GATAAATGTG GGGTTGATCT TTTAGCGGTT GATGTGAAAA AAGGAGATTC TTCCTATTAC TCTGGTATTT TCGTCCGTAA AGACAGTGGC ATTAAAACGA TCGCTGACCT TAAAGGTAAG AGCATGGCTT TTGGTAGCCC AAGTTCAACC TCTTCATTCA ACTTTCCAGT CGCCATGATT ATTGCCGCAG ACGTTGATCC TGTTAACGAC CTTTCTAAAG TGATTATCAC TGGCTCTCAC TCAGCTTCTA TAGCTGCACT TTCAGAAGGT AAAGTAGATG CCGCCGCCGC ATCCTACAAC TCTTTTGGTA AAGCCGCCAA AAAAGGCGCT ATTGATCCTG CCCTATTTAT GCCTTTAGCT AAATCTCAGC CAATCCCAAA CCCGCCTTTA GCTATGAACA AAAGTTTAAA TTCTAAGCTA AAAGCAGAAC TTCGTAAGGC ATTTGGTGAA ATTCATACCA AAATTGATCC TTCAAAAATC CGCGGTTACG GTGGCAAAAA AGTCGATCGT TATGACACTG CATTTGATGA GCAAAAAATC TTTGATGCTT TGAAAAAGCT GAATGCTGTC ACACATGAAT TAAAAGGTGA ACTGCTAGAA AAAGCAGGTC AGCGTTAA
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Protein sequence | MKLKNLLLSV VAIATLTPLA AFALPDGSKE HPLRVLMIPT DTGTNDITKD YGPVFQGITE NYGIHFDIKA GASYAAVVEG MCNDQADIAW FGAVTYGQAN DKCGVDLLAV DVKKGDSSYY SGIFVRKDSG IKTIADLKGK SMAFGSPSST SSFNFPVAMI IAADVDPVND LSKVIITGSH SASIAALSEG KVDAAAASYN SFGKAAKKGA IDPALFMPLA KSQPIPNPPL AMNKSLNSKL KAELRKAFGE IHTKIDPSKI RGYGGKKVDR YDTAFDEQKI FDALKKLNAV THELKGELLE KAGQR
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