Gene Tcr_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1944 
Symbol 
ID3761138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp2131797 
End bp2132444 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content43% 
IMG OID637786687 
Producthypothetical protein 
Protein accessionYP_392208 
Protein GI78486283 
COG category[S] Function unknown 
COG ID[COG4764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0808013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAGT TATTTCCCAC CCTTTTTATT CCGTTGTCAG CTTTGTTATT AGCCAGCTGT 
TCAAGCAATC CGCCCAAGTC GTCATACAAT AATATTTGTT CGGTTTTTGA TCATGATTCG 
GACTGGGAAG ATGCGGCGCT TGATGCGGAA AAAAAGTGGG GCACACCCGC CTATATTTTA 
ATGGCGTTTG TGCATCAGGA ATCACGTTTC AAACATGATG CGCAACCTGA AAGAGAATAT 
GCATTAGGTC TGGTTCCATT ACCAAGACGT TCTTCCGCTT ATGGTTATAC TCAAGCACAA 
GACCCGGCTT GGTATGACTA CCAGAAATCA ACCGGGAACT GGTCAGCAAG ACGTACGAAT 
ATTGAAGACT CGATGGATTT TATTGGCTGG TATAACTATC AATCCTTCAA ACGTAACGGC 
ATCTCTCGAT ATGATACGTA CAATCTTTAT TTAGCGTACC ATGAGGGACA AGGTGGCTAT 
TCGAGAAAGA CTTATCTAAG AAAACCATGG CTTAAAAAGG TGGCCTATAA AGTCACTAAG 
CAATCCATAC GTTACAAAGA GCAACTTAAA CGATGCAACC AGGCCTACTC GTCGTCCAGT 
CCCTCTAAAT CAAATGGTAA ATGCCGAGCG GCATGGCCAT ACTGTTAA
 
Protein sequence
MLKLFPTLFI PLSALLLASC SSNPPKSSYN NICSVFDHDS DWEDAALDAE KKWGTPAYIL 
MAFVHQESRF KHDAQPEREY ALGLVPLPRR SSAYGYTQAQ DPAWYDYQKS TGNWSARRTN 
IEDSMDFIGW YNYQSFKRNG ISRYDTYNLY LAYHEGQGGY SRKTYLRKPW LKKVAYKVTK 
QSIRYKEQLK RCNQAYSSSS PSKSNGKCRA AWPYC