| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1908 |
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| Symbol | |
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| ID | 3761102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2088510 |
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| End bp | 2089832 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637786651 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_392172 |
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| Protein GI | 78486247 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00117224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACACT CTAAGATGAA ATCAACACAT TACCAATCCA ATAGCTTAAC ATTAACCGGT
GCTGTCGCCA TGGGGACGGG CGTCATGATC GGTGCCGGCA TTTTTGCTTT AACAGGGCAA
GTGGCGGAAC TGGCCAAAAG TTGGTTTCCA CTAGCCTTCC TAGTCGCCGC GATTGTTGCA
GGCTTCAGTG CTTACTCTTA TGTCAAAATG GCCAACGCCT ACCCTTCAGC GGGCGGCATT
GCGATGTTTC TCAAAAAGGC CTATGGTAAA ACCGTCATGA CAGGTGCCGG TGCCTTATTG
ATGTATTTTT CCATGGTGAT TAACGAAAGT TTGGTGGCAC GAACGTTTGG CACCTATACC
ATGGAATTAT TTGATACCAG CCAATACGCA GAATGGCTGA TTCCTGCCTT AGGGGTTGGG
TTGTTGTTGG TTGCTTTTTT CATCAATATC TTAAGCAATC GCTTTATCGA GCGCTTTTCT
TTTTTCATGG CGTTCATCAA AATCGGTGGG CTCGTCGTAT TTGCATTAGC CGGTTTGTGG
GTATCCGGCT TGTCTTTTGA AAGCATCTCG GTCTCGCCAC CTGAAGCATC CAGCGGCGGG
GACTTTTTAG GTGCAGTCGC TCTAGCGGTT CTGGCCTACA AAGGGTTTAC CACCATTACA
AACAGCGGTG GGGAAATTAA TCATCCACAT AAGAATGTCG GCCGTGCCAT CATCATTTCA
ATCACACTGT GTCTGGTTCT GTATATGCTG GTAACGTTCG CGATAGGCGC CAACCTCAGT
ATTGACGAAA TTGTTCAAGC AAAAGACTAT GCCTTGGCCG AAGCGGCAAA GCCGGCTTTT
GGTAATGGCG GGTTATGGTT TACCGTGGTG TTCGCAATCG TCGCAACGGT TTCCGGCGTC
ATTGCCAGTG TGTTTGCAGT GAGCCGAATG TTAGCCATGC TCACCGAAAT GAACCTGGTT
CCCCATCGTC ATTTCGGCAT GCCGGGCGAC CTTCAAAAAC ACACCTTGGT GTACACCATT
GTCATTGCAA TGCTTCTAAC CGTATTTTTT GATCTCAGTC GCATTGCCGC CTTAGGGGCA
ATCTTTTACA TCCTGATGGA CATTGCCATC CACTGGGGCG TATTACGTTT TCTTCGTGAA
GACGTTAAGG CCAATGCCGC CATTTTAATC ACCGCTATCG TATTGGACAT CATCATTCTT
GTTGCCTTAA TCGCAGTTAA AGTGCAAACC GATCCGTTAG TGATCTACGT CGCATTGATT
GGATTAGGCG TGATTTTTAT TGGTGAACGA CTCTTTTTAA AACAACAGCG CACGGCCGAC
TAA
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| Protein sequence | MEHSKMKSTH YQSNSLTLTG AVAMGTGVMI GAGIFALTGQ VAELAKSWFP LAFLVAAIVA
GFSAYSYVKM ANAYPSAGGI AMFLKKAYGK TVMTGAGALL MYFSMVINES LVARTFGTYT
MELFDTSQYA EWLIPALGVG LLLVAFFINI LSNRFIERFS FFMAFIKIGG LVVFALAGLW
VSGLSFESIS VSPPEASSGG DFLGAVALAV LAYKGFTTIT NSGGEINHPH KNVGRAIIIS
ITLCLVLYML VTFAIGANLS IDEIVQAKDY ALAEAAKPAF GNGGLWFTVV FAIVATVSGV
IASVFAVSRM LAMLTEMNLV PHRHFGMPGD LQKHTLVYTI VIAMLLTVFF DLSRIAALGA
IFYILMDIAI HWGVLRFLRE DVKANAAILI TAIVLDIIIL VALIAVKVQT DPLVIYVALI
GLGVIFIGER LFLKQQRTAD
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