Gene Tcr_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1884 
Symbol 
ID3762420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp2061475 
End bp2062095 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content45% 
IMG OID637786627 
ProductTetR family transcriptional regulator 
Protein accessionYP_392148 
Protein GI78486223 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.543413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCC AGAAACAAAA TGCAACAGCA TTGAAAATCC GCAACACGGC AACGAAAATG 
TTCGCGGAGC AAGGCTACGA TGGCACAATA ATGGACGAAT TAACCATTCG ATCAGGTGTC 
AACAAAGCTA GCATCTATTA CCACTTTCAA GACAAACCCA ATCTCTATGA ACAGTGTCTG 
ACGCACTTAT TCGCCAACGT TGCCGACGCC GTCATGGAGG CGACCGAACG TGCGGTGACG 
GAAAATCTTA AACTCGAAGC GTTCGTAAAG ACATTCGCAA AACTGGCGTA CGAGAAACCT 
GAAATACCGG CTATTCTGAT GCGAGAAATT GCCTCTGGCG GCCACAACAT GCCCGTTACC 
GCTCGGCAAC AAATGCAGCG ATTATTGTCG AATTTGAAAG CTATTTTAAG TACGGAACCT 
TTTAGCCAAG ACATTGAATC TATCAACCCA CTGACCCCAC ACTTTATGAT TATCGGCAGT 
TTGTGTTTTT ACCTAACAAG CCAACCAATG CGCGATCGTA TCGAGAGCAC TGAAAAGCTT 
GATCCAACAT TGGAGGAATT TACTCAGCAG CTCATTAACA TTTTGCAATC AGGCCTGGTC 
AAAAAAACTA AGGAGATCTA A
 
Protein sequence
MARQKQNATA LKIRNTATKM FAEQGYDGTI MDELTIRSGV NKASIYYHFQ DKPNLYEQCL 
THLFANVADA VMEATERAVT ENLKLEAFVK TFAKLAYEKP EIPAILMREI ASGGHNMPVT 
ARQQMQRLLS NLKAILSTEP FSQDIESINP LTPHFMIIGS LCFYLTSQPM RDRIESTEKL 
DPTLEEFTQQ LINILQSGLV KKTKEI