Gene Tcr_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1835 
Symbol 
ID3761048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2009655 
End bp2010665 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content44% 
IMG OID637786579 
Producthypothetical protein 
Protein accessionYP_392101 
Protein GI78486176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.209638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTA TTACACCTCA AAATGAGTCT GTCAACTATT TGCAGAATCA TGATAGAAAA 
TCAGTCGGTG CATTGGACGA TGCGTTAAAA GCTAAGCAAA GAGCCGAAAG TGTGGCGGTT
CAAGATAATA GTGACGCATC TTCTCAAGCG GCTTCTGATT TCTATTCGCC AACGCTAAAA
GGTATGCAGG CGGCTTCAGC AGTAGAAAAA TATCAGCAAT CCTACCAGTA CAGTCAAACC
ATGACGATGA GCTTGCAAAC TCAGGAAGGT GATGTTGTTC AAGTCGATTT TCGACAGTTG
TATGCGCAAT ACCAGTCGTA TAAGCAAGAG CAGTCCATGC AGGAAAGCCC AAAGGGTGCC
CGTTATTTTG AGAGCACGGA AGTCATGGAG GCGACCGCTT TTCAAGAACG TTTTGGCTTT
TCCGTTAAAG GCGACTTGAA CGAAGACGAG TTGAAGTCCG TTTATGATGT CTTTGAAAAA
GTCGACCAGC TGGCGAATGA GTTCTTTTAC GGTGATATTG AAAAAGCTTT TGAAAAAGCA
CAAAGTTTGG AAATTGATTT TGGACAAATC AAAAGCTTCA ATCTGAATTT ACAAAAAACC
GAAAGCGTAA CAATGGCCTA TCAGCAGACG AACGCCTATA AAGGAACCGA GCAACAAACG
GCGGAACCTT CAGAAGAAAC GAAAGGGCAA ATTGCCCAAT TACCGCCTTA TTTACAAAAT
TGGCAACATA TCATTGAAAA GATGAATGAA AAGTTTGTGA ATGCGCGAGA AACCTTCGAT
CGTTTGTTAG CCGGAACGGC TTCTCAAAGA GCGGGTGAGG AATCCAATTT TGCAACTTGG
TACGATCGAG TTAAATCATT CCATGATAAA TTAGCGGAAG CCGCCGGATT GGACAAGAAA
ACGTTAAAGC CCAGCGGAGT GGAAGTGGAG CCGTTAGCGC ATAAAGGTGA AGAAGAAAGT
CGTTCCTCTG AACCCGTTGT GGAAGACGAG TCGCCAATTT CGAAAGGCTG A
 
Protein sequence
MATITPQNES VNYLQNHDRK SVGALDDALK AKQRAESVAV QDNSDASSQA ASDFYSPTLK 
GMQAASAVEK YQQSYQYSQT MTMSLQTQEG DVVQVDFRQL YAQYQSYKQE QSMQESPKGA
RYFESTEVME ATAFQERFGF SVKGDLNEDE LKSVYDVFEK VDQLANEFFY GDIEKAFEKA
QSLEIDFGQI KSFNLNLQKT ESVTMAYQQT NAYKGTEQQT AEPSEETKGQ IAQLPPYLQN
WQHIIEKMNE KFVNARETFD RLLAGTASQR AGEESNFATW YDRVKSFHDK LAEAAGLDKK
TLKPSGVEVE PLAHKGEEES RSSEPVVEDE SPISKG