Gene Tcr_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1804 
Symbol 
ID3761375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1979573 
End bp1980586 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content42% 
IMG OID637786547 
ProductFatty acid desaturase 
Protein accessionYP_392070 
Protein GI78486145 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAACA AGCAGTCTTT ATTCAGACAT GAAGATGCAA AATGGCCTAA TTTTTTAGCA 
TTTACCTACA TTGCATTAAC GTATGTGTTT GGCTTTGCGT TTATTTTGTC AGAGCCTCTT
TGGTTGAATG TAATTGGCGT GGTGATGTTG GCGCATTCGA TGGTGATTGC CGCTTATTTA
ATTCACGAAG CCGCGCATCA TAGTTTGTTT CGGAATAAAA AACATAACCA GTGGTTTTCT
GAAGTCCTGT TATGGGTGAC GGGCACCAGT TATTCACACT TTGAAGACAT TCAAAACAAA
CATAATCGAC ATCACATTGA CCGAGCCGAT GTGGTTTCTT TTGATTTCCG TCCTTTATTA
CAAAAGCATC CTCTATTTTT AAAAGTCATT AAAGCTTTCG AGTGGGCTTA TATTCCAGCA
TTGGAAATTT GGATGCACTT CCTTGTGATT GTCTTACCGT TTATCAAACA AAGTCGTCGT
TCACGCAGAT TACGTGTTGT GACCGTTTTG ATTTTAAGGG TGCTGTTCTT CTGGGCTTTG
GCCTCCATTT CTATTGATGT GCTTTGGTTG TACCCGATCG CTTATTTGAT GTTTCTGACG
GTGATGCGTT TTATGGATGT GCATCAGCAC ACGTATGAAG TGTTTGAAAC GTTGGATCAG
AAACGCGGAC CAGAGGCAAA ACTCAGAGAC GCTGAGTTTG AAGAACATAA TACCTATTCC
AATTTGTTGT CGTTGCGTTA CCCCTGGGTG AATTTGTTGG TGTTGAATTT TTGTTATCAC
AATGTGCATC ACAAAAGCAT GCTGCAACCT TGGTATCGGT TGCCGAAACT GCATGCCGAG
ATGTTCGGCA ATGACTACCA GCAGATTTTG ACCTTTAAGC ATTTAATCAA AAGTTTTCAT
CGTTATCGCG TGCCCAGAGT GTTGAATGGG GACCCGGTTA ATTTACCGGT GAAGCAAGAC
GAAGGGGAAA GCTTTATCGG GGTCGATGGG GTTTCTTTTT TAACCGCGCA TTAA
 
Protein sequence
MDNKQSLFRH EDAKWPNFLA FTYIALTYVF GFAFILSEPL WLNVIGVVML AHSMVIAAYL 
IHEAAHHSLF RNKKHNQWFS EVLLWVTGTS YSHFEDIQNK HNRHHIDRAD VVSFDFRPLL
QKHPLFLKVI KAFEWAYIPA LEIWMHFLVI VLPFIKQSRR SRRLRVVTVL ILRVLFFWAL
ASISIDVLWL YPIAYLMFLT VMRFMDVHQH TYEVFETLDQ KRGPEAKLRD AEFEEHNTYS
NLLSLRYPWV NLLVLNFCYH NVHHKSMLQP WYRLPKLHAE MFGNDYQQIL TFKHLIKSFH
RYRVPRVLNG DPVNLPVKQD EGESFIGVDG VSFLTAH