Gene Tcr_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1803 
Symbol 
ID3761844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1978772 
End bp1979557 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content45% 
IMG OID637786546 
ProductBeta-lactamase-like 
Protein accessionYP_392069 
Protein GI78486144 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACGC AAGTAACCAA ATTTTGGCCT ATTTTAACCG GCCGCCATAC TTATGAAAAA 
ACCTTGTCGA CTCGAGGCAG AGGGCATGGG GAAATTATTA AAGCGCCGAT TTTGGCGTAT
TTGATTGAAA CGACAAATGG TCGCATTTTG TTTGACGTGG GCTGTGATTA CCAAAAAATT
CAACAAAACG ATCAAAGAAA ACATTATTAC GAGCATGATG GGTTTCCGTT TGGTCCGCCA
GAAATGACGG AAGAGGAACG GTTGCCGAAT CGTTTGGAAG TGTTAGGACT CCAACCGGAA
GACATTGATT TGGTGTTTTG CAGTCATTTG CATTTTGACC ATGCGGGTGG GTTGTGTGAG
TTCTGCCATG CGGAAGTTCA CGTGCATGCT AACGAAATGC AAGCGGCTAA AGAGCCGGCC
GATGAGGCCT ATTTTGCGTC CGATTTTGAA CTGCCTTTGA ATTGGAAAAT TCAAACCGGT
GAATATGATT TGGTGCCGGG TGTCAGTGCG ATTGAAACTC CGGGGCATAC CGCGGGGCAT
ATGTCGATGT TGATAGAGAT GCCAAAAGGC AGCCCTATTT TATTGGCGGG CGATGCGGCG
GATCTTTCGG AAAACATTGA AGAAGAGATC GCGCCCGGGT TGTGTTGGCA AGATAATGAA
CAGTTGGCGA TTGAAAGTAT TAAAAAGTTG AAATACTTAA GCCAAAAAAA CCAAGCGAAC
CTGTGGCCAA ATCATGACTG GGAATTTTTT CAGCGCCATA ATCGTTTTCC GAAGTATTTT
GAGTGA
 
Protein sequence
MMTQVTKFWP ILTGRHTYEK TLSTRGRGHG EIIKAPILAY LIETTNGRIL FDVGCDYQKI 
QQNDQRKHYY EHDGFPFGPP EMTEEERLPN RLEVLGLQPE DIDLVFCSHL HFDHAGGLCE
FCHAEVHVHA NEMQAAKEPA DEAYFASDFE LPLNWKIQTG EYDLVPGVSA IETPGHTAGH
MSMLIEMPKG SPILLAGDAA DLSENIEEEI APGLCWQDNE QLAIESIKKL KYLSQKNQAN
LWPNHDWEFF QRHNRFPKYF E