Gene Tcr_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1786 
Symbol 
ID3761827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1957087 
End bp1957926 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content43% 
IMG OID637786529 
Productamidohydrolase 2 
Protein accessionYP_392052 
Protein GI78486127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000791137 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC TTCCTCAACT TTTACTGTCA TTATTTATAA CGGCATCGTT CAACAGTTAC 
GCAGACACAC TTGCTAATCC GATGCCTATT TTTGACAGTC ACTCGCATTA CTCTTTAGCG
GACAGCCAGG CATTATCCCC AGAGCAGATT CAACAACGTT ACGATCGAAA CCATATTATC
GGCGCCTTAA TCTCCAGCAC CCCCACGGCT AACACAGAGC AACTCTATCG AGCCATGCCA
AATCGCATCA TTCCTTTTTT AAGCCTTTAC AAAACCAAAA CAAACAAGCC CAACTGGATG
CTGGATCTGA CAACACTTCA TGACATTAAT GCCAAACTTG ACCACTTCCC ATATCAAGGA
ATAGGAGAGT TTCATATCTT TAAGCAAGAC GTCTATAGCC CTGTCTTAGC TCAAGTCATT
AAAACCGCTC AACAAAGAAA CTTAATGATC ATGATTCATG GCGACGCTGA AATTGTCGAC
CGCATCTTCA AGCTCGCCCC TAACATTACC GTCATCTGGG CACATTTAGG AACACACCCC
ACCCCTGAAT CGTTATCACA CATTTTCAAA CGATATCCGA CACATTTATA TATGGACACT
TCTGTTAGAG ACAAACTTTT TGTCAGCGCG ACAGGTGAAC TCAAACCTGA ATGGCAAGCC
TTTTTAATTC AACACCAAGA TAAACTTCTG GCCGCCATCG ACACCTTCAG CACCCAACGC
TGGTTAAATT TTGACGACGC TGTCAACAAC CTCCGACTAT GGCTAGAACA ACTCCCAAAA
CCGGTTGCCG AAAAAATTGC CTACCAAAAT GCCTTAAACT TATTCCAACC CGCTCACTAA
 
Protein sequence
MKRLPQLLLS LFITASFNSY ADTLANPMPI FDSHSHYSLA DSQALSPEQI QQRYDRNHII 
GALISSTPTA NTEQLYRAMP NRIIPFLSLY KTKTNKPNWM LDLTTLHDIN AKLDHFPYQG
IGEFHIFKQD VYSPVLAQVI KTAQQRNLMI MIHGDAEIVD RIFKLAPNIT VIWAHLGTHP
TPESLSHIFK RYPTHLYMDT SVRDKLFVSA TGELKPEWQA FLIQHQDKLL AAIDTFSTQR
WLNFDDAVNN LRLWLEQLPK PVAEKIAYQN ALNLFQPAH