| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1724 |
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| Symbol | |
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| ID | 3761023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1884552 |
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| End bp | 1885499 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637786462 |
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| Product | type II secretion system protein |
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| Protein accession | YP_391990 |
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| Protein GI | 78486065 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTGATT TAGGATTCTT GATTGTTGTG CTGGCGATTA TGATGCCGTT TTTGGTATTG
GCGGCAGGCT TTTACTTTAA ATCCAATCGA CAGAAAAAAG AAGCATTGGA CACGCTTATG
CAACGTGTCG GTATTGAATC AAGCCAGAAA CAAAATTATC GTGCAGCGTA TCACACCATT
CAACAAAAAG ATTCCATACT CCGCTGGGGC GCATCGCTGC TTAAAAAAGC CGGATTACAA
GATACCAAAA TAGTGATTCG TCTTTTAGTT ATCCAATCAC TGTTACTCTT TTTCAGTGCC
TATTTATTGT CGACACGATT TAATCATCTT GACGGTAAAG CGGTATTGAT TGCAATTTTA
CTGCCATTAC TTCCATCATT TTTTATTTTG TTTAAGAAGA AACAGCGACA AAATCGATTA
CGACAACAGT TTCCCGAAAT GTTGGATGCC ATTGTTCGTG CGTTACAATC TGGGTATGGA
ATTGATGGTG CTTTGAGTAT GATTGCAGAA GAATTCAGAG CACCTTTAGG GAAAGAAGTG
AAAGAGGTTA ATCGACAATT AACATTGGGG ATTAGCATGA GAGACATTTT GCGCGATTTT
CAGACTCGAA TTGAAATTCC AGAAGCGCAA TTTTTTGTCG TGACATTAAT TATCCAACGA
GAAACAGGAG GCCAGTTAGC GCCGATTTTA GAAGAACTTT CCCGTTTGAT GCGTCGGCGT
GAAATGTTTC AAGCAAAATT AAAAACATTG ACCGCAGAAT CAAGATTTAC CGCGATTTTT
CTAGGACTTG CCCCTCTAGG ATACTTAGGC TATAAGTACT TTTTTGATCC GGATTCGATG
GCCTTCTTCT TAAATGATCC AACCGGACAG GATATTTTGA TTATTTCCCT CGTTCTAATG
ATTTCCGGTG CAATTATTTT GAAGTCAATG TTAAGGATAA AATTCTAA
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| Protein sequence | MLDLGFLIVV LAIMMPFLVL AAGFYFKSNR QKKEALDTLM QRVGIESSQK QNYRAAYHTI
QQKDSILRWG ASLLKKAGLQ DTKIVIRLLV IQSLLLFFSA YLLSTRFNHL DGKAVLIAIL
LPLLPSFFIL FKKKQRQNRL RQQFPEMLDA IVRALQSGYG IDGALSMIAE EFRAPLGKEV
KEVNRQLTLG ISMRDILRDF QTRIEIPEAQ FFVVTLIIQR ETGGQLAPIL EELSRLMRRR
EMFQAKLKTL TAESRFTAIF LGLAPLGYLG YKYFFDPDSM AFFLNDPTGQ DILIISLVLM
ISGAIILKSM LRIKF
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