| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1708 |
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| Symbol | |
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| ID | 3761006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1868822 |
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| End bp | 1869724 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786445 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_391974 |
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| Protein GI | 78486049 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.104417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGA CTCAAAACAT TGCCCGCTTC GAGCTTCACT TCACCCTACA ACAGAGTGAA
AAAACGCTTC TAGAAGCGCT TTCGGAACAC CTTCCAAACG AAGTTCATTT TTCTAATCAA
CAACTAAAAC GCTTCTGTCA GCAAGGCGCG GTTTGGATTT CGGAACCTGG AAACCAACCG
GATCAGCAAA CCAAAAAAGT ACGGGCTCGC CGGGCAAAAA AACAACTTAA AAAAGGGTCT
GAAGTCTCTT TTTATTTTAA TGAAAGCGTT TTAAACGCAA CAATACCGGA CCCTGTTTTA
ATAGAAGATG CCGATGATTT CAGTGTTTGG TACAAACCGA AAGGTGTGTT GTCACAAGGG
TCAAAATGGG GCGACCATAC CACGCTTAAT CGATGGATTG AAACCCATTA TCTTTTTAAA
GAACCGCCTG AAAAACGCCC TTGCTGGATT GTTCATCGGT TGGATAAAGC GACGGATGGT
TTGATTCTCA TTGCCCACAA TAAAAAATCG GCTCAAATGC TGGCGCGCCG ATTTGAGGCA
CATCAAATCG GTAAATCCTA CCAGGCCTGG GTAAAAGGAA AGTTTGGCGA AACTGAACGT
GTTTTTGATC AGGACGTCAA TGGCAAAACG GCTTTAAGCA AAGCTCATCA ACTTGTTTAT
AACTCAGATA ACGATTGTAG CCTGGTTCAA GTGACCATTG CTACGGGGCG GAAACATCAA
ATCAGAATTC ACCTTTCGAA GGCCGGCTTT CCAATCATAG GCGATCGTTT GTATGGCGAT
GCGCAAGAAG GTGATCCCGA CTTGCAACTG ACCGCTGTCG AAATTACCTT TTTATCCCCG
CAAGGGACCA TTGAACAACG GTTTCAATTA CCTGACAACC TCCGGCCAAG TGTCTCGATT
TAA
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| Protein sequence | MTTTQNIARF ELHFTLQQSE KTLLEALSEH LPNEVHFSNQ QLKRFCQQGA VWISEPGNQP
DQQTKKVRAR RAKKQLKKGS EVSFYFNESV LNATIPDPVL IEDADDFSVW YKPKGVLSQG
SKWGDHTTLN RWIETHYLFK EPPEKRPCWI VHRLDKATDG LILIAHNKKS AQMLARRFEA
HQIGKSYQAW VKGKFGETER VFDQDVNGKT ALSKAHQLVY NSDNDCSLVQ VTIATGRKHQ
IRIHLSKAGF PIIGDRLYGD AQEGDPDLQL TAVEITFLSP QGTIEQRFQL PDNLRPSVSI
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