| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1704 |
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| Symbol | |
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| ID | 3761002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1865176 |
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| End bp | 1866213 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637786441 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_391970 |
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| Protein GI | 78486045 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000161104 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTTT TAATCTTATG TTGTTCCCTG TTGGTTTGGC ATACGCCCTC CGTTGTTGCG
AGTGAGGCTT CTTCTGAATC GCGTTGGGTC GAAGCGGTTC AAGTGGCAAC ACCGTCACCC
GACCGTTGGC AATTAACCGG AATCCTTCAA CCTCGTTATC AGTTTACATT GAGTTTTCGA
GTCGCAGGGC AAGTTGAGCA ACGTTTGGTT GAATTAGGGC AGTTTGTTAA AAAGGGTCAA
GTGTTAGCCA AACTTGATCA GGCGGACTTA AAGTTGTCAG TAGAACAAGC AAAAGCCAAC
TTGGCGTCTG CACAATCGAA TATGGAAAAT ACCGCCCGAG AAAGTCAGCG GCTTGCCAAG
CTCTATCGGG ACAAATTGAT TAGCTTACAG CAACTACAGC GTGCGGAAAC GTATGAAACG
GAAAGTCGCC AAGCCATGAT TGCAGCCCAG GCGGCATTGA AACTGGCGCA AAATCAATTG
AATTACAGTG TATTGAAATC GCCGGTAACA GGCACGGTCA GTCAGGTTTC TGTGGAAGCC
GGGCAAATGG TGCCTGCTGG GCAGCCTGTT TTTCAGGTCG TAAGTGAGTT GGCCGAAGCG
GAAGTGTCGT TACCGGCGAA CCGAATCACA AGTGACATTC AATCCGCCTC GTTAACTGGG
GTCGATCATC CCGGACACTG TCAAGTATCT CTACGCGCCA AAAGTCCTCT CAATTCCGCG
TCCGGGCTAC AGTATCAAGC ACGTTATCAA TTGCTGAATT GTTCTCGTTC TTTGCCGTTA
GGCAGTGTGG TGCAACTTCA TTTTCAAACG GCCTTTAAGA ACAAACAACA GTTACCGATT
ACCGCCGTGT TCAATAAAGG GGAACACAGT TATGTTTGGT TGATAGAAGA CCAGCACGTC
ACAGCCAAAC CGGTCACGGT CACGCAGATG ACGAATGAAG TCGCTATTAT CGAAGCGGAT
TTGGAAGATC AGGCTCGAGT CGTCAAGCAA GGAACTCATG CGCTGGTTGA AGATCAATCT
GTGAGTGTTC GTCCATGA
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| Protein sequence | MRFLILCCSL LVWHTPSVVA SEASSESRWV EAVQVATPSP DRWQLTGILQ PRYQFTLSFR
VAGQVEQRLV ELGQFVKKGQ VLAKLDQADL KLSVEQAKAN LASAQSNMEN TARESQRLAK
LYRDKLISLQ QLQRAETYET ESRQAMIAAQ AALKLAQNQL NYSVLKSPVT GTVSQVSVEA
GQMVPAGQPV FQVVSELAEA EVSLPANRIT SDIQSASLTG VDHPGHCQVS LRAKSPLNSA
SGLQYQARYQ LLNCSRSLPL GSVVQLHFQT AFKNKQQLPI TAVFNKGEHS YVWLIEDQHV
TAKPVTVTQM TNEVAIIEAD LEDQARVVKQ GTHALVEDQS VSVRP
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