Gene Tcr_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1592 
Symbol 
ID3760852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1742817 
End bp1743860 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content44% 
IMG OID637786329 
ProductrecA protein 
Protein accessionYP_391858 
Protein GI78485933 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGA ATAAAAAGAA AGCGCTTGAA GCGGCTTTAG GTCAAATTGA AAAGCAGTTT 
GGTAAAGGTT CCATCATGCG AATGGGCGAT AAAGGTGCCA TTCGTGATAT TGATTCCGTT
TCAACCGGTT CTTTAGGGTT GGATGTGGCA TTAGGTATTG GCGGGTTACC GCGTGGTCGA
GTGGTTGAAA TTTACGGCCC GGAATCTTCC GGTAAAACCA CGTTAACGTT GCATGCAATT
GCTGAAATGC AAAAAATGGG TGGAACTGCC GCTTTTGTTG ACGCCGAGCA TGCATTGGAT
CCGATTTACG CAGAAAAGCT TGGGGTCGAT ATTGATAATC TATTGGTCTC TCAGCCGGAC
ACGGGTGAAC AGGCATTGGA AATCACGGAT TCTTTAGTTC GTTCTGGTGC GGTCGATATT
GTTATTGTGG ATTCGGTTGC CGCTTTAACA CCGAAAGCGG AAATTGAAGG CGATATGGGG
GATTCTCATA TGGGCTTGCA GGCGCGTTTA ATGTCGCAAG CCTTGCGTAA GTTAACGGCT
AACATCAAGC GTACCAATAC CTTGGTTATT TTCATTAACC AGATTCGTAT GAAGATCGGG
GTGATGTTTG GTAACCCTGA AACCACAACA GGTGGGAACG CGTTAAAATT TTATTCTTCT
GTTCGCCTGG ATATTCGTCG TATTGGGGCG ATTAAAAAGG GTGATGAAAT TCTGGGGAAT
GAAACGCGTG TTAAAGTGGT GAAAAACAAG GTTTCTCCAC CGTTTAAACA GGTTGAATTT
GAAATTTTAT ACGGCCAGGG AATTTCACGA GAAGGGGAAG TGATTGACCT CGGTGTGAAA
GAAAAACTGA TTGAAAAAGC CGGTGCCTGG TACAGCTACC AAGGTCAAAA AATCGGCCAA
GGTAAAGATA ATGTTCGTCA GTTCTTAAAA GACAATCCTG ACATTTATGA AACCCTTCAG
GTTCAGATTA AAGAGCGTTT GATGCCAAAG CCGAATGCGC CTAAAGCAAC AGATGAAGCG
TTAGACGAAA CCGGAACGGA CTAA
 
Protein sequence
MDENKKKALE AALGQIEKQF GKGSIMRMGD KGAIRDIDSV STGSLGLDVA LGIGGLPRGR 
VVEIYGPESS GKTTLTLHAI AEMQKMGGTA AFVDAEHALD PIYAEKLGVD IDNLLVSQPD
TGEQALEITD SLVRSGAVDI VIVDSVAALT PKAEIEGDMG DSHMGLQARL MSQALRKLTA
NIKRTNTLVI FINQIRMKIG VMFGNPETTT GGNALKFYSS VRLDIRRIGA IKKGDEILGN
ETRVKVVKNK VSPPFKQVEF EILYGQGISR EGEVIDLGVK EKLIEKAGAW YSYQGQKIGQ
GKDNVRQFLK DNPDIYETLQ VQIKERLMPK PNAPKATDEA LDETGTD