Gene Tcr_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1587 
Symbol 
ID3760846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1736616 
End bp1737395 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content40% 
IMG OID637786323 
ProductOmpA/MotB 
Protein accessionYP_391853 
Protein GI78485928 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000101337 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATA TTTCCGACAA AGATTTGGCT GACGCAATCC AGGAGCATCC TGAATTTCAA 
AAAAAAACTC GGGCTAGTTT AAAAAAGCAA TCTGTTGACA AGGAAGGCGG GCAAGATGAA
TGGCTCATCA CCTATGCCGA TGCCATGACC TTGATTTTAG CTTTTTTTAT TTTAATTCTC
TCGATTTCAG AAATAAAACA AGACAAGTTT GAAACGTTAC AAACCAATTT AGGTCAAGGT
CTTTTGAAAA AGGAAAAAGT AGTCAACCCT TTACAAAACC TTGAATCGGC TCTTTCAAAA
GTATTAGAAA GCAACCAAAT AAACCCAGCT GAAGCCATGA CACTTAATGA GAACGAACTG
CGAATTGACC TTCCCGGCGA ATTACTTTTT GAAGTAGGCT CTACACAACT GGAGCCGAAA
TCCAAACAGC TCATTACCGC TCTTGCTAAA GAAATAAACG CTTTCCCACT GCACAATTAT
CTTATTGAGA TTGAAGGCCA TACCGATGAT ACCCCCATTC ACTCAATCCG ATTTCCATCC
AACTGGGAGT TATCTGCAGG TCGAGCCATT TCGGTTCTAA AAGTATTTTT TAATACGGGA
ATTAACAAAC AACGCTTAAA GGCAATTGGT TATGCCGATA CACGTCCGAA AAAACCCAAT
AGAACAAAAA AAGGCATCGC CATTCCCGGC AACCAAGCCA CGAATCGCCG CGTAGAAATT
AAAGTAGCTA AATCCTCAAT TGGAGCACTC AAGTCACCCG AATATCGGCT AAAACATTAA
 
Protein sequence
MNDISDKDLA DAIQEHPEFQ KKTRASLKKQ SVDKEGGQDE WLITYADAMT LILAFFILIL 
SISEIKQDKF ETLQTNLGQG LLKKEKVVNP LQNLESALSK VLESNQINPA EAMTLNENEL
RIDLPGELLF EVGSTQLEPK SKQLITALAK EINAFPLHNY LIEIEGHTDD TPIHSIRFPS
NWELSAGRAI SVLKVFFNTG INKQRLKAIG YADTRPKKPN RTKKGIAIPG NQATNRRVEI
KVAKSSIGAL KSPEYRLKH