| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1516 |
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| Symbol | |
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| ID | 3762086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1651883 |
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| End bp | 1652926 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637786252 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_391782 |
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| Protein GI | 78485857 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGTTT TAATTGTCAA AATGTCCTCA ATGGGGGATG TGTTTCACAC CTTTCCTGCA
TTAAGTGATG CAATGCAGGC GATTCCGGGG CTGCAAGTAG ACTGGATAGT TGAAAAGTCT
TTTGCCGAAA TTCCCGAGTG GCATCCAGTG GTAAATAAAG TGTTTCCAAT TGAGTTGCGT
AAATGGCGCC AAACCTTTTG GAAAAAACAA ACACGACAAG CAATACAGAC ATTTTTTCAG
CAAGTAAATC AGCACCATTA CGATTTTGTG ATTGATGCAC AAGGTTTGTT AAAAAGCGTG
TGGGTTGTTC GAAACATTCA AACAGGTACA AAAGTTGGGT TGGACTGGCA CAGCGCACGA
GAGCCTCTCG CCAGCTTGGG CTATCAGCAA AAAGAGCATG TTCCTAAAAA ACAACATGCC
ATTGAACGAC TCAGACAGCT TTTTTCGAAA ACACTAAATT ATGATTACTC ACCTAAGTCG
TCTATTCACT ATGGATTGGA TACTGCTGAT TGGTTTAAAC CAACTGAGCT TACTCAGCAC
TTCGGTGATG ACGTGTATAG CGTATTTCTA CATGGAACAA CGTGGGATAC TAAGTTGTGG
CCAGAAGACT ATTGGATTGA ATTACTTCAA AAAGTGGTTG ATAAAGAGCG AAAAGTTGTG
CTGCCCTGGG GAACTCAAGA AGAATTAGAG CGTGCCAAAC GTATTGCAAA ATCGGTCAAA
AATGACCAGG CCTGGGTACC TGATGCACCA CTCAGCTTGA GTACGATGGC TCGAATACTC
AAGTTTGCAA AGTTCGTTGT TTCTGTTGAT ACCGGGTTGT CTCATGTTGC AGCCGCACTG
GATGTGCCTA TGGTTGTGCT GTATAGGGTG ACGGATCCAT ATTTGGTTGG AGCCAAAGGC
GAATGTGTCA TGTATTTAGA GTCAGCTTTA AGCAAGCAAT ATATTAAAAA GTTTAAGAAT
GCTCAGCAAT ATGAAAGCTC TTTAGTGGGG TTGAAAACAG AAAATGTTTT AAGTTTGTTA
AAAGAAAAGG TTACTAAAAT TTGA
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| Protein sequence | MRVLIVKMSS MGDVFHTFPA LSDAMQAIPG LQVDWIVEKS FAEIPEWHPV VNKVFPIELR
KWRQTFWKKQ TRQAIQTFFQ QVNQHHYDFV IDAQGLLKSV WVVRNIQTGT KVGLDWHSAR
EPLASLGYQQ KEHVPKKQHA IERLRQLFSK TLNYDYSPKS SIHYGLDTAD WFKPTELTQH
FGDDVYSVFL HGTTWDTKLW PEDYWIELLQ KVVDKERKVV LPWGTQEELE RAKRIAKSVK
NDQAWVPDAP LSLSTMARIL KFAKFVVSVD TGLSHVAAAL DVPMVVLYRV TDPYLVGAKG
ECVMYLESAL SKQYIKKFKN AQQYESSLVG LKTENVLSLL KEKVTKI
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