Gene Tcr_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1502 
Symbol 
ID3761722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1626872 
End bp1627666 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content45% 
IMG OID637786233 
Productflagellin-like 
Protein accessionYP_391768 
Protein GI78485843 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.186778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTG AATCTCTTAA CGCGACAAAC GCGTCCTCCC CATACATGAA CGACCTTTTT 
AAGGTGAATC AAAGTTTAAC ATCCGGCTCC CGAATCAACA ACTCAGCTGA CGATGCTTCA
GGGCAAGCCA TTGTCACTTC TTTAACCACC AAAATTAAAG ATCAGGACAT TGGCGTGCAG
AATGCTAACG TTGGTATCAA CTTGCTTCAA ACGGCTGATG GTGCCAGCAA TAGCATTACG
CAGCAATTAC AACGACTCAG TGAGCTGAGC CTTCAAGCTC AGAACGGAAC CTATTCCGAT
GCACAGAGAG CAATGCTCGA CCAAGAATTT CAACAAGGCT TAAAAAGCAT TAATCAATTC
GCAGAATCGA CTTCATTCAA CGACATTAAA CTACTCAATG CCGACACGCC CACTGTTGAT
ATTGCACTGG GACCAGACAA TGCATCCACC CTTCAACTGC CTGACTTAAC GGTCGCTAAT
TTAGGGCTGA CAGGAACGGA TATTTCAACC AGCACCAATG CCGAAGCCGT ACAATCGAAA
ATTTCAGATG TATTAGGGCT TATTTCAGAC AGTCGCGCTC AACTGGGTTC TCAACAAAAT
GGCCTGGTTT CAGCGGCTAA TAACTTAATG AACCAAAACG TAAATTCTCA ATCGACTCGC
AGCCAGATCA ACGACACAGA TTATGCCAAA GCGGTAACCG ATCAAGCACG ACAGCAAGTA
TTGAACAATG CCTCCGTCGC GATGTTGGCA CAGAGAAATC AAAATTACGG TAATGTCTTA
CCGTTACTGA ATTAA
 
Protein sequence
MAVESLNATN ASSPYMNDLF KVNQSLTSGS RINNSADDAS GQAIVTSLTT KIKDQDIGVQ 
NANVGINLLQ TADGASNSIT QQLQRLSELS LQAQNGTYSD AQRAMLDQEF QQGLKSINQF
AESTSFNDIK LLNADTPTVD IALGPDNAST LQLPDLTVAN LGLTGTDIST STNAEAVQSK
ISDVLGLISD SRAQLGSQQN GLVSAANNLM NQNVNSQSTR SQINDTDYAK AVTDQARQQV
LNNASVAMLA QRNQNYGNVL PLLN