| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1500 |
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| Symbol | |
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| ID | 3761720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1624994 |
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| End bp | 1626238 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637786231 |
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| Product | ammonium transporter |
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| Protein accession | YP_391766 |
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| Protein GI | 78485841 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAA TATTAGAATT AAGCTACGCA TTAGATACTT TTTATTTTCT AATGTCTGGC
GCACTGGTCA TGTGGATGGC AGCAGGTTTT GCCATGCTGG AAGCGGGACT GGTTCGTACC
AAAAATACAA CTGAAATTTT AGCTAAGAAC GTTGGGCTTT TCGCCATTGC CTGTATTATG
TATATGTTGG TTGGTTACAA CATTATGTAT GGTGATGCAA TTAACTCAGT GATTCCTGGT
TTAAGCTTCC TATTAGGTGG TGACAACGCA ACAGCAGCCG TAGTAGCGGG TGGTGATGGT
GCACCTTATT ATTCAAACAT GTCTGACTTC TTCTTCCAGG TTGTGTTCGT AGCGACAGCA
ATGTCTGTTG TATCGGGTGC GGTTGCTGAG CGTATGAAGT TAATGTCTTT CTTCGTGTTT
GCAATTGTCT TAACGTCGGT TATCTATCCT GTCCAAGGTT ATTGGAAATG GGGTGGTGGT
TTCCTAGATC AACTAGGTTT CCTAGACTTC GCAGGTTCAG GGATTGTTCA CATGACAGGT
GCTGCAGCAG CACTAGCCGG TGTCCTTCTA CTTGGTGCCC GTAAAGGTAA ATATGGTCCA
AACGGTGAAT CTAAAGCGAT TCCTGGTGCG AACTTACCGC TTGCAACTTT AGGGACATTC
ATCCTATGGT TAGGTTGGTT CGGTTTCAAC GGTGGTTCAG AGCTTAAAAT CTCTAACGTT
GAAGAAGCAA ACGCAGTATC AATGATTTTT GTTAACACAC TATTAGCTGC GGCAGCTGGT
GTTGTTGGTG CGCTATTGGC GTCTAAAATC AAGTTTGGTA AAGCGGATTT AACAATGATG
CTAAACGGTG CTCTAGCGGG TCTAGTTGCG ATCACGGCTG AGCCTCTAAC GCCAAGCGCT
TTAGAAGCGA CTTTAATCGG TCTTGTCGGT GGTATCATCG TAGTGGCAGC AATCTTGATC
CTTGACAACA AGTTCAAAAT CGATGATCCA GTAGGTGCGA TCTCTGTGCA TGGTGTTGTA
GGTATCTACG GTCTTCTTGC AGTGACGTTC ACTAACCCTG ATTCAAGCTT AGTTGCACAG
TTAATCGGTA TCGCAGCGAT CTTCAGCTGG GTATTCATTA CAAGTTTGAT TGTCTGGGCA
ATCATCAAAG CGGTCATGGG AATCCGTATC TCTGAAGAAG ATGAGTTCGA AGGAGCTGAT
CAGTCAGAAT GTGGTATGGA AGCTTACCCT GAGTTTACAA AGTAA
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| Protein sequence | MEQILELSYA LDTFYFLMSG ALVMWMAAGF AMLEAGLVRT KNTTEILAKN VGLFAIACIM
YMLVGYNIMY GDAINSVIPG LSFLLGGDNA TAAVVAGGDG APYYSNMSDF FFQVVFVATA
MSVVSGAVAE RMKLMSFFVF AIVLTSVIYP VQGYWKWGGG FLDQLGFLDF AGSGIVHMTG
AAAALAGVLL LGARKGKYGP NGESKAIPGA NLPLATLGTF ILWLGWFGFN GGSELKISNV
EEANAVSMIF VNTLLAAAAG VVGALLASKI KFGKADLTMM LNGALAGLVA ITAEPLTPSA
LEATLIGLVG GIIVVAAILI LDNKFKIDDP VGAISVHGVV GIYGLLAVTF TNPDSSLVAQ
LIGIAAIFSW VFITSLIVWA IIKAVMGIRI SEEDEFEGAD QSECGMEAYP EFTK
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