| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1404 |
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| Symbol | |
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| ID | 3760770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1517574 |
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| End bp | 1518491 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637786138 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_391673 |
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| Protein GI | 78485748 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGAAC AGTTTGACAA AATTCACTCG CATATTGAAG CCATCGCGAA TGCAATGCCT
GACCCGATCT TTGTCATGGG ACAAGATGGA ACTTACTTAG ATATTATCGG AGGCCAAGAA
CGCACGTTGT ATGCTGACGG TCATAACCTC ATCGGTAAAA AATACGCCGA CGTTTTACCT
GAAAAAATGG CCGAACGCTT TTTAAAAGTG GTCAACAAAG CTATTCTTTC AGGGCATCTG
CAGGAAATTG AATATCAACT TGCTGACTCT GAAGTTCAAG GCATTGAGCC TTTAAGAACC
ACAGAAGGTC AATGGTATGA AGCCCGCGTT TACCCATTGG ATTCCGAGGC ATATGATCAG
CCAGCCGCCA TTTGGTTAGC AATTAACATT ACCAACCGGA AACATATGGA AGAGCAAATA
GAACGCTTAT CGTCCAATGA CCCTTTAACC GATCTTTATA ATCGAGATTA CTTTATGGGC
GTTATCGATG AAGAGCTCAA CAAAGCACGC CTTAACCAGC GCCCTCTTTC GCTTGCCAAA
ATCAACCTGG ATTGCTTTAA ACGCATTACC GATGCGTATG GTCATGAAAT GGGCGACAAA
GCCATTCTTA CAGCCGCTCA TGCGATCAAA AATGTTGTCG GAGATCTAGG GTATATTGGC
AGACTCAGTT GTGATCAGTT TATGATTGTG CTTCCTGAAA TTAAAGCCGT GGATGCTTTC
CGCATTACCA AACTGGCGCA GGAAACGATT TCATCTCAAA CCATACAGCT GGATAAAGAT
GAAAAGACCT GTTTAACCAG TCATGCTGGC GTAACAGAGT TAAGAGAAGC CAGTGAAGAC
AGTCAGATAC TGTTCAAGCG TGTCAATAAG GCGATTAAAG CGCTCGATGG TACCCGCGAA
AAAACAAAAA TCCTGTAA
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| Protein sequence | MAEQFDKIHS HIEAIANAMP DPIFVMGQDG TYLDIIGGQE RTLYADGHNL IGKKYADVLP
EKMAERFLKV VNKAILSGHL QEIEYQLADS EVQGIEPLRT TEGQWYEARV YPLDSEAYDQ
PAAIWLAINI TNRKHMEEQI ERLSSNDPLT DLYNRDYFMG VIDEELNKAR LNQRPLSLAK
INLDCFKRIT DAYGHEMGDK AILTAAHAIK NVVGDLGYIG RLSCDQFMIV LPEIKAVDAF
RITKLAQETI SSQTIQLDKD EKTCLTSHAG VTELREASED SQILFKRVNK AIKALDGTRE
KTKIL
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