Gene Tcr_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1390 
Symbol 
ID3762026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1503429 
End bp1503719 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content38% 
IMG OID637786124 
Productanti-sigma-factor antagonist domain-containing protein 
Protein accessionYP_391659 
Protein GI78485734 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCC ATAAAATAAA AGACCAAACA CTGTGGATTT ACGTCAGTGA CAAGTTCACA 
ATTGATTCTT TTGCCGACTT TCAAGCGGCC TACACGAACA ACGAATTTAA AGACATAGTA
ATTGATTTTA GCGAAACATC TCATATCGAC AGTGGTGGCC TTGGGATGCT ACTCCAGTTG
CGCACGCATT TAGGAGAAGA CTCCAACCGC ATTACGCTTT GTGGTTTATC AGACCATATT
CTTAAAGTAT TTGAAGTGGT TAACTTCGAA AAACTTTTCA AAATGGCTTA A
 
Protein sequence
MITHKIKDQT LWIYVSDKFT IDSFADFQAA YTNNEFKDIV IDFSETSHID SGGLGMLLQL 
RTHLGEDSNR ITLCGLSDHI LKVFEVVNFE KLFKMA