| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1371 |
|---|
| Symbol | |
|---|
| ID | 3760757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 1486041 |
|---|
| End bp | 1486811 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637786105 |
|---|
| Product | competence lipoprotein ComL |
|---|
| Protein accession | YP_391640 |
|---|
| Protein GI | 78485715 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACT CGCTGATCTC ACTTTTATTT TTCTCTTTAC TCACTTTACA AGCGTGCTCT
CTCGTTGAAA AAGATGAATC CGAATGGACC GTTAAAGACT TCTATTCTCA TGCCAAAGAC
GCGTTTGAAA GTGAGCAGTG GGAAAGCGCC ATTGGTTATT ATGAAAAGCT CAAAGCCTAT
TACCCGTATG GTAAATATGC TGAACAATCC TATCTGGAAC TGGCTTACGC TTATTATCGC
TATGACGAAC CGGAATCAGC CCAGCGCGAA CTGGAAGAGT TTATTCGACT CTACCCAAAG
CACGCTGAAC TGGCTTATGC GTACTACCTT CGAGCACTTG CAGCCGATTC AATCAATAAA
AGCTGGCTAG ACAGTTGGTT AACCGACCCT GCAATGCGGG ACATGGCTTC CACCACAAAA
GCTTATCAAG CCTACATTGA TCTACTGAAT CGCTTTCCGA ATAGTAAATA CGCCGCTAAA
TCACGTGAAC GTTTAATTGT TCTTCGAAAT CGATTAGCTC GCCATGAATA TCAGGTGGCT
GAGTATTATT TTAAACGCCA AGCTTACCTT GCAGCGGCCA ATCGTGCTAA ACAGATTATT
GAGTCTTACC CCCGTTCCAT GGTCAACATG AAAGCACTGG GCTTAATGAA AGAAGCTTAT
GCGAAGCTAG GCATGACCCA AAACGCAGAC AATGTTCAAT CGGTTATTGA TTTAAACACC
CAGCAGATTA AAGACCAACA GGCTGAAAAA GAAGCTGCCG ATAAAGAATA A
|
|---|
| Protein sequence | MKHSLISLLF FSLLTLQACS LVEKDESEWT VKDFYSHAKD AFESEQWESA IGYYEKLKAY
YPYGKYAEQS YLELAYAYYR YDEPESAQRE LEEFIRLYPK HAELAYAYYL RALAADSINK
SWLDSWLTDP AMRDMASTTK AYQAYIDLLN RFPNSKYAAK SRERLIVLRN RLARHEYQVA
EYYFKRQAYL AAANRAKQII ESYPRSMVNM KALGLMKEAY AKLGMTQNAD NVQSVIDLNT
QQIKDQQAEK EAADKE
|
|---|
| |