Gene Tcr_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1369 
Symbol 
ID3760755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1484130 
End bp1484774 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID637786103 
Producthypothetical protein 
Protein accessionYP_391638 
Protein GI78485713 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCTCG CCACCCACGT GGGGGATGAT CAACAGGCTG TTATTAAGAA TCGTGAACGG 
CTACAACAGG CTTTAGAGCT TCCAAGCCAG CCTTTCTGGC TAGCACAAGA ACACACGCAT 
AATGTCCTTT TCTGGGAAGG GCAATCTTAT GAAATTCCAC CGGTTGCTGA CGCTTCTTGG 
ACAACGGGAT CGGATTTGGT TTCTTGTGTT CTAACGGCAG ACTGTTTGCC ACTGTTGGTG 
ACGAATAAAG AAGGCCGTTT TGTGGCCGCC ATTCACGCAG GTTGGAAAGG GTTGGCTGAG 
GGAATCGTTT CAAACACCAT TCAGGCCTTA CCGGGTCAGC GAGAAGACAT GTTGGTGTGG 
GTTGGGCCTG CAATCAGTCA GCCATATTTT GAAGTGGGAA AAGATGTGTT TGACGCCTTT 
GTAGGTGACA GCGTAGGGGC GGAAACGTTT TTCAAACCGC ACGCTACACA GCTCCAAAAA 
TGGTATGCCG ACTTGCCAGG CCTGGCTGAA TTTAAGCTCA ACCAGTTAGG GATTGGGCAA 
GTTTTTCAAA GTGGGTTGTG CAGTTATCGT GATCACAATT GGTTTTATTC TTACCGAAGA 
GATCAGCAAA CGGGCAGAAT GGCGTCTTTG ATTTGGATGG AATAA
 
Protein sequence
MNLATHVGDD QQAVIKNRER LQQALELPSQ PFWLAQEHTH NVLFWEGQSY EIPPVADASW 
TTGSDLVSCV LTADCLPLLV TNKEGRFVAA IHAGWKGLAE GIVSNTIQAL PGQREDMLVW 
VGPAISQPYF EVGKDVFDAF VGDSVGAETF FKPHATQLQK WYADLPGLAE FKLNQLGIGQ 
VFQSGLCSYR DHNWFYSYRR DQQTGRMASL IWME