Gene Tcr_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1345 
Symbol 
ID3760707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1460008 
End bp1460691 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content46% 
IMG OID637786077 
Productglutamate synthase, alpha subunit-like 
Protein accessionYP_391614 
Protein GI78485689 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0070] Glutamate synthase domain 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGG AATTCGATTT AAAAAAACAA ACGGTAAGAG AGCTCAATCA GGCGTTGCAT 
GATTTGCCTA AAGATTCTAC TTCTTCCGTC ATCGTCAATG GTATTAGTGG TGACCATAAT 
TTATGTGTCG GCATGGACCA GCCGGTTGAT ATCACTTTGA ACGGTCACGC GGGCTATTAT 
TGTGCGGGCA TGAATAAATC GGCCAACATT ACGGTGATGG GGAATGTTGG TCAAGGGGTA 
GCCGAGAACA TGATGTCTGG CAAGGTTCAC GTTAAAGGAA ATGCCAGTCA ATCTGCCGCA 
GCTACGGCTC ATGGTGGGCT TTTAGTGGTA GAGGGGGATG CCGCTGCACG ATGTGGAATT 
TCAATGAAAG GCGTTAATAT TGTGGTCAAA GGCTCTGTGG GGCATATGAG TGCATTTATG 
GGACAGTCGG GCTGTTTGGT TGTGTGTGGT GATGCCGGGG ATGCATTAGG CGATTCCCTT 
TATGAAGCCC ATCTTTATGT TAAGGGAAAA GTGGCCTCTT TGGGGGCGGA CTGCGTTGAA 
AAAGAGATGC GTCCGGAACA TATCAAAGAA CTGCAAGCAT TATTGAATGA AGCCGGCTGT 
AAAGATAAAC CGGAAGACTT TACTCGTTAT GGTTCGGCTC GCCAGCTGTA TACGTTCAAG 
GTTGATAATG CATCAGCGTA TTAA
 
Protein sequence
MDMEFDLKKQ TVRELNQALH DLPKDSTSSV IVNGISGDHN LCVGMDQPVD ITLNGHAGYY 
CAGMNKSANI TVMGNVGQGV AENMMSGKVH VKGNASQSAA ATAHGGLLVV EGDAAARCGI 
SMKGVNIVVK GSVGHMSAFM GQSGCLVVCG DAGDALGDSL YEAHLYVKGK VASLGADCVE 
KEMRPEHIKE LQALLNEAGC KDKPEDFTRY GSARQLYTFK VDNASAY