| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1307 |
|---|
| Symbol | |
|---|
| ID | 3760689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1424568 |
|---|
| End bp | 1425467 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637786039 |
|---|
| Product | UbiA prenyltransferase |
|---|
| Protein accession | YP_391576 |
|---|
| Protein GI | 78485651 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00200527 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAT TGAAAAGTTT GTTGGAGGTG ACACGGCCGC CTTTTTTATT ACTGACGCTG
GTGATTATGG CCTTGGTGGT GGCAACCGCA TCCTATGAAG GATTTGATTG GTCAGGTGCA
TTGTTTATGC TGGTGTTGCT GGGAGCGGTT TCGGCTCACA TCAGTGTGAA CATCTTAAAT
GAACTTGAAG ATTATGAGTC CGGACTGGAT GCCATGACGC AAAAAACGCC TTTCAGTGGG
GGCAGCGGCG CGCTTATTAA GAACCCACAG GCGGCCGAAG CGGTGGGCTC GTTGGGGTAT
TTGTTTTTAG GTATTGTGAT CAGTTTAGGG GGCTTTTTTG TTTATTTACG CGGCTGGGAG
CTGTTGCCCA TCGGAATCGC GGGGCTTTTA TTAATTGTCT TTTATACCTC TAAAATAACC
CGCAGGCCGT GGTTGTGTTT AATTAGCCCC GGTCTTGCAT TTGGCCCTTT GATGATGACA
GGGTCTTATT TTGTGTTAAC CGGTGAATAC AGCTGGGTTA TTTTCGGGCT CTCCATTATC
GTGTTCTTGT TAGTCAATAA CCTATTGCTT TTAAATCAAT TTCCGGATGA AGAAGCGGAT
CGAAAAGTGG GACGTTTCAA TATTTTGATG CATTTAGGGT CGCAAAATAG CAGTGTTATT
TTTAACAGCT TTTTGGGGTT AAGTTATTTG GTTCTGGCTT ATATGATTGT TGATGGCTGG
CTTCCGTATT GGGCAGGCCT GGGCTTTTTT ACACTGATTC TCGCTTGGCC GCTTCGAGTT
ACAGTAAAAT ATCACCATCA TTCGTTAACA AAATTATTGC CGGCATTGGG CTTGAATGTT
TCTGTAGTAT TGCTACTGCC TAGCTTGATT GCGGTTGGGT TGGTGTTGGC ATTGCCTTAA
|
|---|
| Protein sequence | MKLLKSLLEV TRPPFLLLTL VIMALVVATA SYEGFDWSGA LFMLVLLGAV SAHISVNILN
ELEDYESGLD AMTQKTPFSG GSGALIKNPQ AAEAVGSLGY LFLGIVISLG GFFVYLRGWE
LLPIGIAGLL LIVFYTSKIT RRPWLCLISP GLAFGPLMMT GSYFVLTGEY SWVIFGLSII
VFLLVNNLLL LNQFPDEEAD RKVGRFNILM HLGSQNSSVI FNSFLGLSYL VLAYMIVDGW
LPYWAGLGFF TLILAWPLRV TVKYHHHSLT KLLPALGLNV SVVLLLPSLI AVGLVLALP
|
|---|
| |