| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1189 |
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| Symbol | |
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| ID | 3760607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1300377 |
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| End bp | 1301036 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785917 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_391458 |
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| Protein GI | 78485533 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTC AATGTGTTTT ATTTGATTTA GACGGCACCC TTTTGGACAC CTCGTACGAC
TTTGCCTACG CATTAAATCA AACTTGTCGC CATTACGGCC AGGCCCCCTT ACGCTACCAA
GATATTCGTA AAACGGTTTC TCAAGGTGGG CTTGCGATGA CGCAACTTGC TTTTCCTGGA
TTGGAAGGGG AAGAACTGGA AACCAGAAGA CAGTTTTTTC TGGATGTGTA TTTCAAAAAC
ATCGATCATC ACACTCGTGT TTTTCCTGGA CTGGAAGCAG GTCTGGCTGA AATTGCCCAA
AAAAACCTAA ACTGGGGCAT TGTCACCAAT AAGCCAGGGT GGTTAACGGA AAAATTACTG
GAAAACATTT CTTTCCCGTC TAAGCCGATG AGTGTTATTT CAGGCGACAC GTTAAGTGTG
AGAAAGCCGC ATCCTGAGCC GTTGTTATTA GCGGCACAAC AATGTGGTGT AGAACCGGAA
AATTGTATTT ATATTGGCGA TCATCCAAGG GATATTGAAG CGGGCATCAA TGCCGGCATG
CAAACCGGCG CAGCCATGTT TGGTTATTTG CCAGAAGCCG CACAGGAAAC GGCCTGGCCT
GCCAGTCATT TCTTTGAAAC ACCCATTGAG ATCACCCACT TTATTCGAGA GAAATTATGA
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| Protein sequence | MSIQCVLFDL DGTLLDTSYD FAYALNQTCR HYGQAPLRYQ DIRKTVSQGG LAMTQLAFPG
LEGEELETRR QFFLDVYFKN IDHHTRVFPG LEAGLAEIAQ KNLNWGIVTN KPGWLTEKLL
ENISFPSKPM SVISGDTLSV RKPHPEPLLL AAQQCGVEPE NCIYIGDHPR DIEAGINAGM
QTGAAMFGYL PEAAQETAWP ASHFFETPIE ITHFIREKL
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