Gene Tcr_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1169 
Symbol 
ID3760314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1274051 
End bp1275262 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content40% 
IMG OID637785893 
Producthypothetical protein 
Protein accessionYP_391438 
Protein GI118139515 
COG category[R] General function prediction only 
COG ID[COG1033] Predicted exporters of the RND superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGAC GCTGGGCATT CAACTGGGTA CAAATAATGG GGCATCACTA TAGATCCCTT 
ATGGCGCTAT TTACCCTCAT GTCATTAGGC ATCCTAGCAG GACTGTTTAA CGATTTATTT
ATATTAGATT TACAAAGCAG CCTGTACATC GGAGCGAGTC TTTTAGTGAT GTCTCTTTGG
GCCATGAAAA TCATGGACTC GATAAAAACC GGCGGGTTGC TCTTTTTACT GAGTGGTTAT
GTGGTATTGA TGTTAGCGGG AACCATGGCC TGGTTTGAAA TATCGTTTGA TGATCATTCT
GTCTTAGGTT GGGTTGTGAT CATTGCCATG ATGATGAGCA ATCTAATTCA CGTCTTATCG
ACCTTATTAA GGGAAATGGC TCGGGGAAGT TTCCAGCATG ATGCTCTGGC TGAAGCGCTA
AAGCAAAATG CCATGCCTAT TTTGTTATCA AATATCACGA CCTGTTTTGG GTTTGTTGTC
GCCGCTTTTT ATGATGCTAG TTTTTATACC ATGACCTGGA TTGTCGTATC AGGTGCCATT
ATCAGCTATC TGACACTGTT TTCATGGTTA CCCATCATTT TATTAACGTT TTTTTTGGAA
TTTCGAGTTG GGCATTATGA TGATCGGCAT GGTCTGATTG ATTTAATCAG TCGAATTCAA
CAATACCCTC GTGCCATAAA ATGGGGCGTA GGCATTTCTT TTATGGTGAT GCTGGCCAGT
CTGATTTATC TGAGTCAGTT CATGACACAG TTGAATTCCG TAGGCGTCAT GCTATTGGCC
AGTTTTGCTC TGTTATTAAT TATTTGGCAA GATCTAAAAA TAACTTTTAT AACCCTTCTA
AGCAGTTTTT TATCGGTTGT CATCGTTTTA GCCGCTTATT TTTCTTTCCA GAATGTACTG
TCAATTTCAG CATTTGTTTT GGTTGTTCCG TTAGGCATGG TGTTGGACGA TGCCATTCAT
TATTTCTCCC GTTATTTGAA GTCTAAACGT GGATTCTTTA ATGATGATGC ATCTTGCCAC
CGATTTGCAC TGAGCACGGT AGGGCGACCT ATCTGGTTGA CAACACAGCT GTTAATGATT
GGTTTATTGA TATTAAGTTT TCATCCAAAT GATCTGATTC AGCAAGCCAG TTTCATTACA
ATTTTTGCGG TTTTTTTAGC CTCTTATATT ATTTTGGTGT TATTGCCAGT GCTTCGTTTA
CAACGGTCGT AA
 
Protein sequence
MTGRWAFNWV QIMGHHYRSL MALFTLMSLG ILAGLFNDLF ILDLQSSLYI GASLLVMSLW 
AMKIMDSIKT GGLLFLLSGY VVLMLAGTMA WFEISFDDHS VLGWVVIIAM MMSNLIHVLS
TLLREMARGS FQHDALAEAL KQNAMPILLS NITTCFGFVV AAFYDASFYT MTWIVVSGAI
ISYLTLFSWL PIILLTFFLE FRVGHYDDRH GLIDLISRIQ QYPRAIKWGV GISFMVMLAS
LIYLSQFMTQ LNSVGVMLLA SFALLLIIWQ DLKITFITLL SSFLSVVIVL AAYFSFQNVL
SISAFVLVVP LGMVLDDAIH YFSRYLKSKR GFFNDDASCH RFALSTVGRP IWLTTQLLMI
GLLILSFHPN DLIQQASFIT IFAVFLASYI ILVLLPVLRL QRS