| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1125 |
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| Symbol | |
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| ID | 3762066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1214582 |
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| End bp | 1215493 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785846 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_391394 |
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| Protein GI | 78485469 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAA AGCAGTGGCA AAAAATTGAC GGGATTGTGC TTCTAAACAA GCCCGAAGGC
GTAACTTCAA ATGGATTGTT ACAACAGGTA AGGCGTGTTT ATAATGCCAA AAAAGCGGGG
CATACAGGGG CTTTAGATCC TTTTGCTACT GGATTGTTAC CTATTTGTTT AGGGGAAGCG
ACGAAAATTT CCGGCTTGTT GTTAGACTCC GATAAACGTT ATATTGCCAC ATTGCAATTA
GGGCTTGAGA CGGATTCTGG CGATAAGGAT GGCAATCCTT TGAAAACTAT CGCCGTTCCT
GCATTGAGCA AAGCGATGTT GGAAACGGTA TTCTCTCAGT TTGAGGGCGA TGTTATGCAG
GTTCCGCCTA TGTATTCGGC TTTAAAGCAT CAAGGAAAAC CTTTATACGA ATATGCTCGA
AAGGGCATTC ATATTGAGCG TGCGGCCCGT CCAATTCATA TTTACGAACT CAAGTTGATT
GATTTTGAAA ACACGGTTGT GCGTTTTGAA GTGTTGTGTT CAAAAGGTAC TTACGTCAGA
ACACTCGGGG AAGATATTGC TAAAGCTCTA GGAACGGTCG GACATTTAAC TGGATTGCAT
CGAACGCAAA CAGGTGCGTT GACCGGAGAT GAAATGGCGA CCCTGGAAGA AATTGAGTTG
AATAAAGACG CTTATCTTCA ACCCTTGGAT CTACCGCTAA AGCATCTTCA AGCGATTCAT
TTAAATGCGA AAGATACGGA TAAGATTCTA CATGGTGGGA AACTGGCCGT TGAAGAGCCT
GAAACCCTTT TGGTACGCTT TTACGACCCG CAGCAACGTT TTATTGGGGT TGGCGAGTGG
CAGCAAGAAA AACAATTGCT GAAGCCTAAG CGGTTGTTTA ATCTCAACCC TATCGGCGAC
GATCACTCTT AA
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| Protein sequence | MAKKQWQKID GIVLLNKPEG VTSNGLLQQV RRVYNAKKAG HTGALDPFAT GLLPICLGEA
TKISGLLLDS DKRYIATLQL GLETDSGDKD GNPLKTIAVP ALSKAMLETV FSQFEGDVMQ
VPPMYSALKH QGKPLYEYAR KGIHIERAAR PIHIYELKLI DFENTVVRFE VLCSKGTYVR
TLGEDIAKAL GTVGHLTGLH RTQTGALTGD EMATLEEIEL NKDAYLQPLD LPLKHLQAIH
LNAKDTDKIL HGGKLAVEEP ETLLVRFYDP QQRFIGVGEW QQEKQLLKPK RLFNLNPIGD
DHS
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