| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1076 |
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| Symbol | |
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| ID | 3761824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1154814 |
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| End bp | 1155440 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637785797 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_391345 |
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| Protein GI | 78485420 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATTACT CCGAAAAATT CAACAGCATC ACTCACTTGA TCGGTACCAT TTTTTCATTA
ATGGGTCTCG GAGCCTTGTT GACCGTCAGT TTTTATGAGC AAGACCTGTT GCTGTTTATC
GGCTTTTTAA CATTTGGCCT AACATTGGTC ATGCTTTATA GTTTTTCAAC GCTTTACCAT
AGTCTTAAAG ATCCTTTTGC CAAACGCGTG TTCCAAAAGC TCGACCATGT CGCCATTTAT
TTATTGATTG CCGGAACCTA CACCCCTTTT ACCTTGGTTA CTTTAATCGA CAGCAGTGGC
ATCAATATGC TCATCGCTGT CTGGTCACTG GCATTCATTG GCATCAGTCT TGATTTGTTT
CTTAAACACC GTATTGAACT GATTCAAATC GCCATCTATT TGATCATGGG GTGGTTAGTG
GTGGTCGACT TTTCTGAACT GAAAGAAGCC TTACCTTTTG TGGGCATCTT CTGGTTGACT
GCTGGTGGAC TCGCTTACAC TATTGGCATC ACTTTTTATG TGCTTGATCA TAAAAAACGA
CTACGTCACG CCCACGGTAT CTGGCATCTA TTTGTACTGG CAGGCTCCAT CAGCCACTTC
ATCGCCATTA TAGGTTATGT GCGTTAA
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| Protein sequence | MYYSEKFNSI THLIGTIFSL MGLGALLTVS FYEQDLLLFI GFLTFGLTLV MLYSFSTLYH
SLKDPFAKRV FQKLDHVAIY LLIAGTYTPF TLVTLIDSSG INMLIAVWSL AFIGISLDLF
LKHRIELIQI AIYLIMGWLV VVDFSELKEA LPFVGIFWLT AGGLAYTIGI TFYVLDHKKR
LRHAHGIWHL FVLAGSISHF IAIIGYVR
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