Gene Tcr_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1052 
Symbol 
ID3760574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1127961 
End bp1128857 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content45% 
IMG OID637785773 
Producthypothetical protein 
Protein accessionYP_391321 
Protein GI78485396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCATC GACATTTTGC TCGATTGATC TGGGTGCTGC TGCAATGGCC ACTTTGGTTC 
ACTCTTTCAA ACGTATCGAT TGCGGATACC TCTTCACAGA CAAGCCCCTT TGACCCCAAA
ATTACCTTGG TATATGGTTA TTTGAACCAA GGCGGTATCC GCGGTTCCAG CGGTGAGTTT
TCCGATTATG TCTATGACTT TCAAGTACAA AATGCTCTTG GCTATTTTGG TTATACTCAA
TGGAACTTGG ATTGGTACAA CGTTGACCAA CTGCCGTTTG GTAATGGACA AGACCAGCCT
ATCAACCATC TGCATAAAAT GAAACTCGGT GGTAAACTGA GCAAGTTGTT GAATGATAAG
ATGCGCTGGA TCAATGTTAT TGGTGCTTCA TCGGCTTATG AAGCGGAAAT GGATGACTCT
TACAGTATTA ATCTGCGCAG TTTTGTGATG TATCAATATC ACTCAGATCT CACTCTCCTG
GCTGGTGCGA TGTATAATTT TCATCCGGTT CGAAGCCGAT TTTATCCTAT TGTCGGCGCG
GCTTATCGCG CGAATGCAAA GCAAGGTTTG TCCGCCGTCA TTGGCTTTCC ACGTTTGTTT
GTTGCTTATG GGTTGAGCGA GCATTGGAAA GTCAGCAGTG GGGTGTCTTA TCGGCAGTTC
ATGGCAAAGT TGGCAAATGA CAGTACCATC GAACAGCAAG GTTATGTGGA ATTGCAAAGT
TGGAAGGGCG ACGTGATGTT ATCTTATCAA CCGGATGCTC ACTGGCGAGT TGACGTATTC
GGCCATTACT CAGCTGATTA TCGGTTTGCT TTCTATAATC GTTATGGTAA CCGACAAGAC
CAGTATAAAG TCCAGCCTAG CTGGGGTGGC GGTATGAAGC TACATTACCA GTTTTGA
 
Protein sequence
MMHRHFARLI WVLLQWPLWF TLSNVSIADT SSQTSPFDPK ITLVYGYLNQ GGIRGSSGEF 
SDYVYDFQVQ NALGYFGYTQ WNLDWYNVDQ LPFGNGQDQP INHLHKMKLG GKLSKLLNDK
MRWINVIGAS SAYEAEMDDS YSINLRSFVM YQYHSDLTLL AGAMYNFHPV RSRFYPIVGA
AYRANAKQGL SAVIGFPRLF VAYGLSEHWK VSSGVSYRQF MAKLANDSTI EQQGYVELQS
WKGDVMLSYQ PDAHWRVDVF GHYSADYRFA FYNRYGNRQD QYKVQPSWGG GMKLHYQF