| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0996 |
|---|
| Symbol | |
|---|
| ID | 3762174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1072179 |
|---|
| End bp | 1073465 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637785717 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_391265 |
|---|
| Protein GI | 78485340 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATAGTC TGCCCATATC TGCCCTTTTC GGCATATTAG CTTTATTAAT TATCCTTTCT
GCTTTATTTT CCGGCACCGA AACCGGAATG ATGGCTCTGA ACAAATATCG CCTGAAACAT
AAAGTTAAAG AAGGCCATAA AGGCGCCATC AAAGCCCAAA AACTTCTTGA GACACCTGAC
CGTTTGCTCG GCGTGATTCT TCTTGGAAAC AACTTCGTTA ACATCTTCGC CTCTTCTGTT
GCAACGATTA TTGCCATGCG ATTAATTGGT GAAGCCGGGA TTGCACTTGC CGCAGGGATA
TTAACCATGG TCATTTTGGT GTTTTCTGAA GTGGCACCTA AAACATTAGC CGCGTTGCAC
CCGGAACGCA TTGCTTACCC AGCCGCTTAC GTTTTGGAAC CTCTGTTAAA ACTGTTATCG
CCTTTGGTTT GGTTAGTGAA TTTTTTCGCC AACAATTTTT TGCGTTTGTT CGGCGTTAAA
GTCAGACGAA ACAATCCAGA CAGCCATTCT TTAAGTCGTG AAGAGCTTCA AACCCTCATC
AATGAAGCGA CCGGACGTTT GCCGAAACAA TACCGAACCA TGCTCAGTGG CATTATGCAG
CTGGAAAGCA TTACCGTTGA AGACGTGATG ATTCCAAAGC AAGATATTTA TGGGATTGAT
GTCAACCAAC CGATTGAAGA AATTGTTAAG CGCATTGTTA AATCGCCCTT TACCCGAATT
CCGGTGTACC GAGATAACTT GGATGAAGAC ATTTTAGGCG TCATCAATTT ACGTAAAGCC
TTGCCGCTGT TGACCAAGCC GGACTTGTCT TTAAAAGACT TAATCAAGGC CACACGACCG
GGTTACTTTA TCCCGGAAAC GACCACCTTG AACATTCAGT TATCGCACTT CAACAAGCAC
AAACGCCATA TGGCCTTAAT TGTGGATGAA TACGGTAACC TGCAAGGTTT GTTGACGCTG
GAAGACCTGT TGGAAGAGAT TGTTGGTAAA TTCAGTACAG ACACACGTGA AAAAGCGTTT
ACACGTGTTC ACATGCATGA AGATGGCTCG ATTACCTTTG ATGCCTCTGA ATTCATTCGT
GATCTGAACA AAACCTATCA CTTTAATTTA CCGACCGATG GGCCTAAAAC ATTGAATGGT
CTTATCCAGG AAGAACTGGA AACCCTCCCG GAAGTGGGAA CCTGTCTTCG TGTTGGTAAC
TACACGCTCG AAGTCATTGA AACCTCTAAA CATGCGATTG AAAAGGTCAA TTTAAATGAA
ATTGACCCAA CGCAACGTTT TCACTAA
|
|---|
| Protein sequence | MNSLPISALF GILALLIILS ALFSGTETGM MALNKYRLKH KVKEGHKGAI KAQKLLETPD
RLLGVILLGN NFVNIFASSV ATIIAMRLIG EAGIALAAGI LTMVILVFSE VAPKTLAALH
PERIAYPAAY VLEPLLKLLS PLVWLVNFFA NNFLRLFGVK VRRNNPDSHS LSREELQTLI
NEATGRLPKQ YRTMLSGIMQ LESITVEDVM IPKQDIYGID VNQPIEEIVK RIVKSPFTRI
PVYRDNLDED ILGVINLRKA LPLLTKPDLS LKDLIKATRP GYFIPETTTL NIQLSHFNKH
KRHMALIVDE YGNLQGLLTL EDLLEEIVGK FSTDTREKAF TRVHMHEDGS ITFDASEFIR
DLNKTYHFNL PTDGPKTLNG LIQEELETLP EVGTCLRVGN YTLEVIETSK HAIEKVNLNE
IDPTQRFH
|
|---|
| |