| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0895 |
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| Symbol | |
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| ID | 3761366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 974702 |
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| End bp | 975391 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785615 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_391165 |
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| Protein GI | 78485240 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000627927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAATC ATTCGTTAAT GGAATTAATT TTAGATGCCA GTCCTGTTGT TCAAGCAGTG
ATGGTTATTT TATTATTGAT GTCAATTATG GCGTGGGCGA TAACGTTTGC AAAATCTTAT
CAATTACGTA AAGCGCAGCG TGAAGCCAGA GATTTCGATG AATTGTTTTG GAGCACGCCT
GAATTAACCG GGCTGTATAA CCAAGTCACC CGTGACGAGG ATAATACGGG GAATGCTCAG
ATATTTGAAG CCGGCTTTAA AGAATTTATG AGTTTGAAAA GCCAGGGTGT CATCGATTCG
GCCGACTTGA TTAATGGAAC GCAACGCGCG ATGCGAGTGG CGTTTTCAAA GCAGATTGAG
CGCTTAGAAA ATCAAACGCC GTTATTGGCA ACGGTTGGGT CATCAGCGCC TTATATCGGG
TTGTTTGGAA CCGTTTGGGG GGTTATGCAT GCGTTTTCTT CGTTAGGCGA TATTCAAAAT
GCGACCTTAG CCTCGGTTGC CCCAGGGATT TCAGAAGCCT TAATTGCAAC CGCGATGGGG
TTGTTTGCTG CGATTCCAGC CGTTATTGCC TATAACCGTT TGAGCGTCAA CACGGATAAA
GTCATTGGTC AGTACGAAAA TTTTGCTGAA GGATTTTTAA CCATTATTCA GCGTCAATCT
CACATGATCG AAAAAAAGAC ACAAGATTAA
|
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| Protein sequence | MNNHSLMELI LDASPVVQAV MVILLLMSIM AWAITFAKSY QLRKAQREAR DFDELFWSTP
ELTGLYNQVT RDEDNTGNAQ IFEAGFKEFM SLKSQGVIDS ADLINGTQRA MRVAFSKQIE
RLENQTPLLA TVGSSAPYIG LFGTVWGVMH AFSSLGDIQN ATLASVAPGI SEALIATAMG
LFAAIPAVIA YNRLSVNTDK VIGQYENFAE GFLTIIQRQS HMIEKKTQD
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