Gene Tcr_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0826 
Symbol 
ID3762154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp897797 
End bp898432 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content43% 
IMG OID637785545 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_391096 
Protein GI78485171 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTG AACAATTTAT ATTTTATCTG TTAGCGGGTA TTTCTGTTTT TTCGGCCCTG 
ATGGTCATCA GTGTTAAAAA CCCGGTTAAA GCTGCGTTGT GGTTGGTTTT AACATTTATT 
GCAACGGCAG GGGTTTGGCT AACGGCGCAA GCTGAGTTCT TGGGCTTGGT TTTAATCCTC 
GTGTATGTTG GTGCCGTTAT GGTTCTGTTC TTATTCGTGG TGATGATGCT GGATATTAAT 
CTGGCACAGC TGAAAGAAGG GTTTACACGT TATTTGCCTT TGGGTGTCCT TGCGGCCACG 
GCAATTTTTG CTTTGATGTA TTTAGTACTG GGACCAGAGC GTTTCGGTTT AGAGCAATTT 
GCTGCACCGC AATCTGCGGG CGGAGAATAT AGCAACACCA AGTCTATCGC TGTTCCTTTA 
TATACCACAC ATGTTTATGC CTTTATTTTG GCGGCCGTTT TGTTGTTGGT CGGTATTGTC 
GCGGCAATCA CCTTGACCCT AAGACGCAGA CCACCTAAAG AAGTCTTATA TCAAGATATC 
GATAAACAAG TGAGAGTTCA GGCATCAGAT CGTTTCAAAA TGGTCAAAAT GGATGCGGTG 
AAGGAAAAAG ATATTCCAGT GAAGGAGGAA GACTGA
 
Protein sequence
MTFEQFIFYL LAGISVFSAL MVISVKNPVK AALWLVLTFI ATAGVWLTAQ AEFLGLVLIL 
VYVGAVMVLF LFVVMMLDIN LAQLKEGFTR YLPLGVLAAT AIFALMYLVL GPERFGLEQF 
AAPQSAGGEY SNTKSIAVPL YTTHVYAFIL AAVLLLVGIV AAITLTLRRR PPKEVLYQDI 
DKQVRVQASD RFKMVKMDAV KEKDIPVKEE D