| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0793 |
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| Symbol | |
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| ID | 3760407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 865706 |
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| End bp | 866953 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785511 |
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| Product | peptidase S13, D-Ala-D-Ala carboxypeptidase C |
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| Protein accession | YP_391063 |
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| Protein GI | 78485138 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.979643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGACGAC TGCTGTATCA ATGGAGTGTT GGCGCTGGGC TTTTGCTGGG AAGTTTTCTC
TTGCATGCCG CACCGGCTTC CGTTTCTTTA AAGGAAGCGT TGAGTCAGCT CCATGAAACA
GGGGTGTTGA TGTTGAATGC ACAGCAGGAA CCCGTCATTG AAAAAGACGC TTCCAAGCTC
AGAGTGCCAG CCTCCACCAC AAAATTGGTG ACGGCTTATT TAGCGTTGAA ACATTGGGGG
GCGGATTATC GGTTTAAAAC CGATTTTTAT ATCACTCGAA CGACTCATGG CACCTCGTCG
CTTTGGGTAA AAGGTTACGG TGATCCTTTC CTCGTGTCTG AAGAAATTCA AAAACTGGCT
GAAAATTTAG CGTATCGATT GAAAGCATCG GGAATCAAAA CGGTTGATGA AATCATTTTG
GATACCGGGT ATTTTGAGAC CAATGTCGTG CTTCCCGGTC GATCGAACAC GGATAATCCT
TACGATGCGA TTCCTGGAGC GTTGGCCGCC AATTTTAATA CGCTTTATTT AAAAAAAGTG
CGCGGTGCAA TTGTATCTGC TGAGCCTCAA ACCCCATTAA CACCCCTTGC GGTGGCGTTG
GGAAAACACA CCAATTTAAA GCATGGGCGT TTTAATCTAG GGGGTAATGC CAAAACTGGT
GAGCGGTATT TTGCAGAGCT ATTATCTGTC TTCTTGCAGC GTTCAGGTAT TGCGGTGGCG
CAAAATGTGA AATGGCGCAG TCTGAATCAT CAACAGGATT TGAAAGAATC GCCGCCGTTT
TATCGGCATC TGAACAGCTT AACGTTGGCT GAAATCATTC AGCCCATGAT GCGTTATTCG
ACCAATTTTA TTGCAAACCA GTTGGCGCTG AAATTGAGTG CCGAGAGATT AGGTGTGCCT
GCATCACCAG AGAAAGTCAA GCAGATGATG CGGACGGATT TAACACATTA TTTGGGATGG
CAGGATTTTT ATCTGGAAGA CGGCGCCGGA CTGTCTCATC AGAATCGACT CAGCCCGCAG
CAGTTGGTAG TCTTATTGGA AGCTTTTCGG CCTTGGAAAT CGTTGTTGCC GGAAATCGAA
GATCAAATTT TTGCTAAATC GGGAACGTTA ATCGGCGTCA GTACTTTGGC TGGCTATATC
TATCAGCAAC AGCATTGGCT TCCGTTTGCG TTGATGATTA ATCAGCCAGT GCCCTTTCAT
TACAAAAACC AGTTGGCGTT ACAGCTCAAG CAACAGCTTG AAAAATGA
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| Protein sequence | MRRLLYQWSV GAGLLLGSFL LHAAPASVSL KEALSQLHET GVLMLNAQQE PVIEKDASKL
RVPASTTKLV TAYLALKHWG ADYRFKTDFY ITRTTHGTSS LWVKGYGDPF LVSEEIQKLA
ENLAYRLKAS GIKTVDEIIL DTGYFETNVV LPGRSNTDNP YDAIPGALAA NFNTLYLKKV
RGAIVSAEPQ TPLTPLAVAL GKHTNLKHGR FNLGGNAKTG ERYFAELLSV FLQRSGIAVA
QNVKWRSLNH QQDLKESPPF YRHLNSLTLA EIIQPMMRYS TNFIANQLAL KLSAERLGVP
ASPEKVKQMM RTDLTHYLGW QDFYLEDGAG LSHQNRLSPQ QLVVLLEAFR PWKSLLPEIE
DQIFAKSGTL IGVSTLAGYI YQQQHWLPFA LMINQPVPFH YKNQLALQLK QQLEK
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